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Multiple 3D RNA Structure Superposition Using Neighbor Joining.
Hoksza D, Svozil D. Hoksza D, et al. Among authors: svozil d. IEEE/ACM Trans Comput Biol Bioinform. 2015 May-Jun;12(3):520-30. doi: 10.1109/TCBB.2014.2351810. IEEE/ACM Trans Comput Biol Bioinform. 2015. PMID: 26357263
mmView: a web-based viewer of the mmCIF format.
Cech P, Svozil D. Cech P, et al. Among authors: svozil d. BMC Res Notes. 2011 Apr 12;4:121. doi: 10.1186/1756-0500-4-121. BMC Res Notes. 2011. PMID: 21486459 Free PMC article.
SETTER: web server for RNA structure comparison.
Cech P, Svozil D, Hoksza D. Cech P, et al. Among authors: svozil d. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W42-8. doi: 10.1093/nar/gks560. Epub 2012 Jun 11. Nucleic Acids Res. 2012. PMID: 22693209 Free PMC article.
Bioinformatic analysis of the protein/DNA interface.
Schneider B, Cerný J, Svozil D, Cech P, Gelly JC, de Brevern AG. Schneider B, et al. Among authors: svozil d. Nucleic Acids Res. 2014 Mar;42(5):3381-94. doi: 10.1093/nar/gkt1273. Epub 2013 Dec 11. Nucleic Acids Res. 2014. PMID: 24335080 Free PMC article.
A DNA structural alphabet provides new insight into DNA flexibility.
Schneider B, Boǽíková P, Nečasová I, Čech P, Svozil D, Černý J. Schneider B, et al. Among authors: svozil d. Acta Crystallogr D Struct Biol. 2018 Jan 1;74(Pt 1):52-64. doi: 10.1107/S2059798318000050. Epub 2018 Jan 1. Acta Crystallogr D Struct Biol. 2018. PMID: 29372899 Free PMC article.
44 results