Stunnenberg HG - Search Results

1

Dynamics of gene silencing during X inactivation using allele-specific RNA-seq.

Marks H, Kerstens HH, Barakat TS, Splinter E, Dirks RA, van Mierlo G, Joshi O, Wang SY, Babak T, Albers CA, Kalkan T, Smith A, Jouneau A, de Laat W, Gribnau J, Stunnenberg HG. Marks H, et al. Among authors: stunnenberg hg. Genome Biol. 2015 Aug 3;16(1):149. doi: 10.1186/s13059-015-0698-x. Genome Biol. 2015. PMID: 26235224 Free PMC article.

2

High-resolution analysis of epigenetic changes associated with X inactivation.

Marks H, Chow JC, Denissov S, Françoijs KJ, Brockdorff N, Heard E, Stunnenberg HG. Marks H, et al. Among authors: stunnenberg hg. Genome Res. 2009 Aug;19(8):1361-73. doi: 10.1101/gr.092643.109. Epub 2009 Jul 6. Genome Res. 2009. PMID: 19581487 Free PMC article.

3

Insightful tales from single embryonic cells.

Marks H, Veenstra GJ, Stunnenberg HG. Marks H, et al. Among authors: stunnenberg hg. Cell Stem Cell. 2010 May 7;6(5):397-8. doi: 10.1016/j.stem.2010.04.008. Cell Stem Cell. 2010. PMID: 20452308 Free article.

4

Epigenetic regulation of learning and memory by Drosophila EHMT/G9a.

Kramer JM, Kochinke K, Oortveld MA, Marks H, Kramer D, de Jong EK, Asztalos Z, Westwood JT, Stunnenberg HG, Sokolowski MB, Keleman K, Zhou H, van Bokhoven H, Schenck A. Kramer JM, et al. Among authors: stunnenberg hg. PLoS Biol. 2011 Jan 4;9(1):e1000569. doi: 10.1371/journal.pbio.1000569. PLoS Biol. 2011. PMID: 21245904 Free PMC article.

5

Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis.

Bogdanovic O, Long SW, van Heeringen SJ, Brinkman AB, Gómez-Skarmeta JL, Stunnenberg HG, Jones PL, Veenstra GJ. Bogdanovic O, et al. Among authors: stunnenberg hg. Genome Res. 2011 Aug;21(8):1313-27. doi: 10.1101/gr.114843.110. Epub 2011 Jun 2. Genome Res. 2011. PMID: 21636662 Free PMC article.

6

Coactivation of GR and NFKB alters the repertoire of their binding sites and target genes.

Rao NA, McCalman MT, Moulos P, Francoijs KJ, Chatziioannou A, Kolisis FN, Alexis MN, Mitsiou DJ, Stunnenberg HG. Rao NA, et al. Among authors: stunnenberg hg. Genome Res. 2011 Sep;21(9):1404-16. doi: 10.1101/gr.118042.110. Epub 2011 Jul 12. Genome Res. 2011. PMID: 21750107 Free PMC article.

7

An RNA-Seq strategy to detect the complete coding and non-coding transcriptome including full-length imprinted macro ncRNAs.

Huang R, Jaritz M, Guenzl P, Vlatkovic I, Sommer A, Tamir IM, Marks H, Klampfl T, Kralovics R, Stunnenberg HG, Barlow DP, Pauler FM. Huang R, et al. Among authors: stunnenberg hg. PLoS One. 2011;6(11):e27288. doi: 10.1371/journal.pone.0027288. Epub 2011 Nov 10. PLoS One. 2011. PMID: 22102886 Free PMC article.

8

Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk.

Brinkman AB, Gu H, Bartels SJ, Zhang Y, Matarese F, Simmer F, Marks H, Bock C, Gnirke A, Meissner A, Stunnenberg HG. Brinkman AB, et al. Among authors: stunnenberg hg. Genome Res. 2012 Jun;22(6):1128-38. doi: 10.1101/gr.133728.111. Epub 2012 Mar 30. Genome Res. 2012. PMID: 22466170 Free PMC article.

9

The transcriptional and epigenomic foundations of ground state pluripotency.

Marks H, Kalkan T, Menafra R, Denissov S, Jones K, Hofemeister H, Nichols J, Kranz A, Stewart AF, Smith A, Stunnenberg HG. Marks H, et al. Among authors: stunnenberg hg. Cell. 2012 Apr 27;149(3):590-604. doi: 10.1016/j.cell.2012.03.026. Cell. 2012. PMID: 22541430 Free PMC article.

10

Transcriptome analysis using RNA-Seq.

Hoeijmakers WA, Bártfai R, Stunnenberg HG. Hoeijmakers WA, et al. Among authors: stunnenberg hg. Methods Mol Biol. 2013;923:221-39. doi: 10.1007/978-1-62703-026-7_15. Methods Mol Biol. 2013. PMID: 22990781

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