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Computational Metabolomics Operations at BioCyc.org.
Karp PD, Billington R, Holland TA, Kothari A, Krummenacker M, Weaver D, Latendresse M, Paley S. Karp PD, et al. Among authors: billington r. Metabolites. 2015 May 22;5(2):291-310. doi: 10.3390/metabo5020291. Metabolites. 2015. PMID: 26011592 Free PMC article.
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases.
Caspi R, Billington R, Ferrer L, Foerster H, Fulcher CA, Keseler IM, Kothari A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Subhraveti P, Weaver DS, Karp PD. Caspi R, et al. Among authors: billington r. Nucleic Acids Res. 2016 Jan 4;44(D1):D471-80. doi: 10.1093/nar/gkv1164. Epub 2015 Nov 2. Nucleic Acids Res. 2016. PMID: 26527732 Free PMC article.
The BioCyc collection of microbial genomes and metabolic pathways.
Karp PD, Billington R, Caspi R, Fulcher CA, Latendresse M, Kothari A, Keseler IM, Krummenacker M, Midford PE, Ong Q, Ong WK, Paley SM, Subhraveti P. Karp PD, et al. Among authors: billington r. Brief Bioinform. 2019 Jul 19;20(4):1085-1093. doi: 10.1093/bib/bbx085. Brief Bioinform. 2019. PMID: 29447345 Free PMC article.
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.
Caspi R, Altman T, Billington R, Dreher K, Foerster H, Fulcher CA, Holland TA, Keseler IM, Kothari A, Kubo A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Subhraveti P, Weaver DS, Weerasinghe D, Zhang P, Karp PD. Caspi R, et al. Among authors: billington r. Nucleic Acids Res. 2014 Jan;42(Database issue):D459-71. doi: 10.1093/nar/gkt1103. Epub 2013 Nov 12. Nucleic Acids Res. 2014. PMID: 24225315 Free PMC article.
The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.
Keseler IM, Mackie A, Santos-Zavaleta A, Billington R, Bonavides-Martínez C, Caspi R, Fulcher C, Gama-Castro S, Kothari A, Krummenacker M, Latendresse M, Muñiz-Rascado L, Ong Q, Paley S, Peralta-Gil M, Subhraveti P, Velázquez-Ramírez DA, Weaver D, Collado-Vides J, Paulsen I, Karp PD. Keseler IM, et al. Among authors: billington r. Nucleic Acids Res. 2017 Jan 4;45(D1):D543-D550. doi: 10.1093/nar/gkw1003. Epub 2016 Nov 28. Nucleic Acids Res. 2017. PMID: 27899573 Free PMC article.
The MetaCyc database of metabolic pathways and enzymes.
Caspi R, Billington R, Fulcher CA, Keseler IM, Kothari A, Krummenacker M, Latendresse M, Midford PE, Ong Q, Ong WK, Paley S, Subhraveti P, Karp PD. Caspi R, et al. Among authors: billington r. Nucleic Acids Res. 2018 Jan 4;46(D1):D633-D639. doi: 10.1093/nar/gkx935. Nucleic Acids Res. 2018. PMID: 29059334 Free PMC article.
The EcoCyc Database.
Karp PD, Ong WK, Paley S, Billington R, Caspi R, Fulcher C, Kothari A, Krummenacker M, Latendresse M, Midford PE, Subhraveti P, Gama-Castro S, Muñiz-Rascado L, Bonavides-Martinez C, Santos-Zavaleta A, Mackie A, Collado-Vides J, Keseler IM, Paulsen I. Karp PD, et al. Among authors: billington r. EcoSal Plus. 2018 Nov;8(1):10.1128/ecosalplus.ESP-0006-2018. doi: 10.1128/ecosalplus.ESP-0006-2018. EcoSal Plus. 2018. PMID: 30406744 Free PMC article. Review.
The MetaCyc database of metabolic pathways and enzymes - a 2019 update.
Caspi R, Billington R, Keseler IM, Kothari A, Krummenacker M, Midford PE, Ong WK, Paley S, Subhraveti P, Karp PD. Caspi R, et al. Among authors: billington r. Nucleic Acids Res. 2020 Jan 8;48(D1):D445-D453. doi: 10.1093/nar/gkz862. Nucleic Acids Res. 2020. PMID: 31586394 Free PMC article.
161 results