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Characterization and dynamics of pericentromere-associated domains in mice.
Wijchers PJ, Geeven G, Eyres M, Bergsma AJ, Janssen M, Verstegen M, Zhu Y, Schell Y, Vermeulen C, de Wit E, de Laat W. Wijchers PJ, et al. Among authors: de laat w, de wit e. Genome Res. 2015 Jul;25(7):958-69. doi: 10.1101/gr.186643.114. Epub 2015 Apr 16. Genome Res. 2015. PMID: 25883320 Free PMC article.
Human heterochromatin proteins form large domains containing KRAB-ZNF genes.
Vogel MJ, Guelen L, de Wit E, Peric-Hupkes D, Lodén M, Talhout W, Feenstra M, Abbas B, Classen AK, van Steensel B. Vogel MJ, et al. Among authors: de wit e. Genome Res. 2006 Dec;16(12):1493-504. doi: 10.1101/gr.5391806. Epub 2006 Oct 12. Genome Res. 2006. PMID: 17038565 Free PMC article.
Variegated gene expression caused by cell-specific long-range DNA interactions.
Noordermeer D, de Wit E, Klous P, van de Werken H, Simonis M, Lopez-Jones M, Eussen B, de Klein A, Singer RH, de Laat W. Noordermeer D, et al. Among authors: de klein a, de laat w, de wit e. Nat Cell Biol. 2011 Jun 26;13(8):944-51. doi: 10.1038/ncb2278. Nat Cell Biol. 2011. PMID: 21706023 Free PMC article.
4C technology: protocols and data analysis.
van de Werken HJ, de Vree PJ, Splinter E, Holwerda SJ, Klous P, de Wit E, de Laat W. van de Werken HJ, et al. Among authors: de vree pj, de laat w, de wit e. Methods Enzymol. 2012;513:89-112. doi: 10.1016/B978-0-12-391938-0.00004-5. Methods Enzymol. 2012. PMID: 22929766
Robust 4C-seq data analysis to screen for regulatory DNA interactions.
van de Werken HJ, Landan G, Holwerda SJ, Hoichman M, Klous P, Chachik R, Splinter E, Valdes-Quezada C, Oz Y, Bouwman BA, Verstegen MJ, de Wit E, Tanay A, de Laat W. van de Werken HJ, et al. Among authors: de laat w, de wit e. Nat Methods. 2012 Oct;9(10):969-72. doi: 10.1038/nmeth.2173. Epub 2012 Sep 9. Nat Methods. 2012. PMID: 22961246
313 results