Ma C - Search Results

1

RNA sequencing of laser-capture microdissected compartments of the maize kernel identifies regulatory modules associated with endosperm cell differentiation.

Zhan J, Thakare D, Ma C, Lloyd A, Nixon NM, Arakaki AM, Burnett WJ, Logan KO, Wang D, Wang X, Drews GN, Yadegari R. Zhan J, et al. Among authors: ma c. Plant Cell. 2015 Mar;27(3):513-31. doi: 10.1105/tpc.114.135657. Epub 2015 Mar 17. Plant Cell. 2015. PMID: 25783031 Free PMC article.

2

Application of the Gini correlation coefficient to infer regulatory relationships in transcriptome analysis.

Ma C, Wang X. Ma C, et al. Plant Physiol. 2012 Sep;160(1):192-203. doi: 10.1104/pp.112.201962. Epub 2012 Jul 13. Plant Physiol. 2012. PMID: 22797655 Free PMC article.

3

KGBassembler: a karyotype-based genome assembler for Brassicaceae species.

Ma C, Chen H, Xin M, Yang R, Wang X. Ma C, et al. Bioinformatics. 2012 Dec 1;28(23):3141-3. doi: 10.1093/bioinformatics/bts586. Epub 2012 Oct 7. Bioinformatics. 2012. PMID: 23044544

4

The Reference Genome of the Halophytic Plant Eutrema salsugineum.

Yang R, Jarvis DE, Chen H, Beilstein MA, Grimwood J, Jenkins J, Shu S, Prochnik S, Xin M, Ma C, Schmutz J, Wing RA, Mitchell-Olds T, Schumaker KS, Wang X. Yang R, et al. Among authors: ma c. Front Plant Sci. 2013 Mar 21;4:46. doi: 10.3389/fpls.2013.00046. eCollection 2013. Front Plant Sci. 2013. PMID: 23518688 Free PMC article.

5

Dynamic expression of imprinted genes associates with maternally controlled nutrient allocation during maize endosperm development.

Xin M, Yang R, Li G, Chen H, Laurie J, Ma C, Wang D, Yao Y, Larkins BA, Sun Q, Yadegari R, Wang X, Ni Z. Xin M, et al. Among authors: ma c. Plant Cell. 2013 Sep;25(9):3212-27. doi: 10.1105/tpc.113.115592. Epub 2013 Sep 20. Plant Cell. 2013. PMID: 24058158 Free PMC article.

6

Machine learning-based differential network analysis: a study of stress-responsive transcriptomes in Arabidopsis.

Ma C, Xin M, Feldmann KA, Wang X. Ma C, et al. Plant Cell. 2014 Feb;26(2):520-37. doi: 10.1105/tpc.113.121913. Epub 2014 Feb 11. Plant Cell. 2014. PMID: 24520154 Free PMC article.

7

Dynamic parent-of-origin effects on small interfering RNA expression in the developing maize endosperm.

Xin M, Yang R, Yao Y, Ma C, Peng H, Sun Q, Wang X, Ni Z. Xin M, et al. Among authors: ma c. BMC Plant Biol. 2014 Jul 24;14:192. doi: 10.1186/s12870-014-0192-8. BMC Plant Biol. 2014. PMID: 25055833 Free PMC article.

8

Machine learning for Big Data analytics in plants.

Ma C, Zhang HH, Wang X. Ma C, et al. Trends Plant Sci. 2014 Dec;19(12):798-808. doi: 10.1016/j.tplants.2014.08.004. Epub 2014 Sep 12. Trends Plant Sci. 2014. PMID: 25223304 Review.

9

Opaque-2 Regulates a Complex Gene Network Associated with Cell Differentiation and Storage Functions of Maize Endosperm.

Zhan J, Li G, Ryu CH, Ma C, Zhang S, Lloyd A, Hunter BG, Larkins BA, Drews GN, Wang X, Yadegari R. Zhan J, et al. Among authors: ma c. Plant Cell. 2018 Oct;30(10):2425-2446. doi: 10.1105/tpc.18.00392. Epub 2018 Sep 27. Plant Cell. 2018. PMID: 30262552 Free PMC article.

10

Genome optimization via virtual simulation to accelerate maize hybrid breeding.

Cheng Q, Jiang S, Xu F, Wang Q, Xiao Y, Zhang R, Zhao J, Yan J, Ma C, Wang X. Cheng Q, et al. Among authors: ma c. Brief Bioinform. 2022 Jan 17;23(1):bbab447. doi: 10.1093/bib/bbab447. Brief Bioinform. 2022. PMID: 34676389

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