Park PJ - Search Results

1

hiHMM: Bayesian non-parametric joint inference of chromatin state maps.

Sohn KA, Ho JW, Djordjevic D, Jeong HH, Park PJ, Kim JH. Sohn KA, et al. Among authors: park pj. Bioinformatics. 2015 Jul 1;31(13):2066-74. doi: 10.1093/bioinformatics/btv117. Epub 2015 Feb 27. Bioinformatics. 2015. PMID: 25725496 Free PMC article.

2

Comparing expression profiles of genes with similar promoter regions.

Park PJ, Butte AJ, Kohane IS. Park PJ, et al. Bioinformatics. 2002 Dec;18(12):1576-84. doi: 10.1093/bioinformatics/18.12.1576. Bioinformatics. 2002. PMID: 12490441

3

Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data.

Lai WR, Johnson MD, Kucherlapati R, Park PJ. Lai WR, et al. Among authors: park pj. Bioinformatics. 2005 Oct 1;21(19):3763-70. doi: 10.1093/bioinformatics/bti611. Epub 2005 Aug 4. Bioinformatics. 2005. PMID: 16081473 Free PMC article.

4

A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies.

Kuo WP, Liu F, Trimarchi J, Punzo C, Lombardi M, Sarang J, Whipple ME, Maysuria M, Serikawa K, Lee SY, McCrann D, Kang J, Shearstone JR, Burke J, Park DJ, Wang X, Rector TL, Ricciardi-Castagnoli P, Perrin S, Choi S, Bumgarner R, Kim JH, Short GF 3rd, Freeman MW, Seed B, Jensen R, Church GM, Hovig E, Cepko CL, Park P, Ohno-Machado L, Jenssen TK. Kuo WP, et al. Nat Biotechnol. 2006 Jul;24(7):832-40. doi: 10.1038/nbt1217. Epub 2006 Jul 2. Nat Biotechnol. 2006. PMID: 16823376

5

Integrative analysis reveals the direct and indirect interactions between DNA copy number aberrations and gene expression changes.

Lee H, Kong SW, Park PJ. Lee H, et al. Among authors: park pj. Bioinformatics. 2008 Apr 1;24(7):889-96. doi: 10.1093/bioinformatics/btn034. Epub 2008 Feb 8. Bioinformatics. 2008. PMID: 18263644 Free PMC article.

6

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

Lai W, Choudhary V, Park PJ. Lai W, et al. Among authors: park pj. Bioinformatics. 2008 Apr 1;24(7):1014-5. doi: 10.1093/bioinformatics/btn067. Epub 2008 Feb 22. Bioinformatics. 2008. PMID: 18296463 Free PMC article.

7

nuScore: a web-interface for nucleosome positioning predictions.

Tolstorukov MY, Choudhary V, Olson WK, Zhurkin VB, Park PJ. Tolstorukov MY, et al. Among authors: park pj. Bioinformatics. 2008 Jun 15;24(12):1456-8. doi: 10.1093/bioinformatics/btn212. Epub 2008 Apr 29. Bioinformatics. 2008. PMID: 18445607 Free PMC article.

8

Integration of heterogeneous expression data sets extends the role of the retinol pathway in diabetes and insulin resistance.

Park PJ, Kong SW, Tebaldi T, Lai WR, Kasif S, Kohane IS. Park PJ, et al. Bioinformatics. 2009 Dec 1;25(23):3121-7. doi: 10.1093/bioinformatics/btp559. Epub 2009 Sep 28. Bioinformatics. 2009. PMID: 19786482 Free PMC article.

9

Quantized correlation coefficient for measuring reproducibility of ChIP-chip data.

Peng S, Kuroda MI, Park PJ. Peng S, et al. Among authors: park pj. BMC Bioinformatics. 2010 Jul 27;11:399. doi: 10.1186/1471-2105-11-399. BMC Bioinformatics. 2010. PMID: 20663215 Free PMC article.

10

Advances in analysis of transcriptional regulatory networks.

Kim TM, Park PJ. Kim TM, et al. Among authors: park pj. Wiley Interdiscip Rev Syst Biol Med. 2011 Jan-Feb;3(1):21-35. doi: 10.1002/wsbm.105. Wiley Interdiscip Rev Syst Biol Med. 2011. PMID: 21069662 Review.

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