Touzet H - Search Results

1

Kopylova E, Noé L, Da Silva C, Berthelot JF, Alberti A, Aury JM, Touzet H. Kopylova E, et al. Among authors: touzet h. Methods Mol Biol. 2015;1269:279-91. doi: 10.1007/978-1-4939-2291-8_17. Methods Mol Biol. 2015. PMID: 25577385

2

Comparative analysis of RNA genes: the caRNAc software.

Touzet H. Touzet H. Methods Mol Biol. 2007;395:465-74. doi: 10.1007/978-1-59745-514-5_29. Methods Mol Biol. 2007. PMID: 17993692

3

RNA locally optimal secondary structures.

Saffarian A, Giraud M, de Monte A, Touzet H. Saffarian A, et al. Among authors: touzet h. J Comput Biol. 2012 Oct;19(10):1120-33. doi: 10.1089/cmb.2010.0178. J Comput Biol. 2012. PMID: 23057822

4

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data.

Kopylova E, Noé L, Touzet H. Kopylova E, et al. Among authors: touzet h. Bioinformatics. 2012 Dec 15;28(24):3211-7. doi: 10.1093/bioinformatics/bts611. Epub 2012 Oct 15. Bioinformatics. 2012. PMID: 23071270 Free article.

5

MATAM: reconstruction of phylogenetic marker genes from short sequencing reads in metagenomes.

Pericard P, Dufresne Y, Couderc L, Blanquart S, Touzet H. Pericard P, et al. Among authors: touzet h. Bioinformatics. 2018 Feb 15;34(4):585-591. doi: 10.1093/bioinformatics/btx644. Bioinformatics. 2018. PMID: 29040406

6

DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.

Saad C, Noé L, Richard H, Leclerc J, Buisine MP, Touzet H, Figeac M. Saad C, et al. Among authors: touzet h. BMC Bioinformatics. 2018 Jun 11;19(1):223. doi: 10.1186/s12859-018-2215-1. BMC Bioinformatics. 2018. PMID: 29890948 Free PMC article.

7

Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data.

Lima L, Marchet C, Caboche S, Da Silva C, Istace B, Aury JM, Touzet H, Chikhi R. Lima L, et al. Among authors: touzet h. Brief Bioinform. 2020 Jul 15;21(4):1164-1181. doi: 10.1093/bib/bbz058. Brief Bioinform. 2020. PMID: 31232449 Free article. Review.

8

miRkwood: a tool for the reliable identification of microRNAs in plant genomes.

Guigon I, Legrand S, Berthelot JF, Bini S, Lanselle D, Benmounah M, Touzet H. Guigon I, et al. Among authors: touzet h. BMC Genomics. 2019 Jun 28;20(1):532. doi: 10.1186/s12864-019-5913-9. BMC Genomics. 2019. PMID: 31253093 Free PMC article.

9

Detecting MicroRNAs in Plant Genomes with miRkwood.

Legrand S, Guigon I, Touzet H. Legrand S, et al. Among authors: touzet h. Methods Mol Biol. 2022;2512:103-120. doi: 10.1007/978-1-0716-2429-6_8. Methods Mol Biol. 2022. PMID: 35818003

10

Porechop_ABI: discovering unknown adapters in Oxford Nanopore Technology sequencing reads for downstream trimming.

Bonenfant Q, Noé L, Touzet H. Bonenfant Q, et al. Among authors: touzet h. Bioinform Adv. 2022 Nov 21;3(1):vbac085. doi: 10.1093/bioadv/vbac085. eCollection 2023. Bioinform Adv. 2022. PMID: 36698762 Free PMC article.

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