Pandurangan AP - Search Results

1

Stepwise visualization of membrane pore formation by suilysin, a bacterial cholesterol-dependent cytolysin.

Leung C, Dudkina NV, Lukoyanova N, Hodel AW, Farabella I, Pandurangan AP, Jahan N, Pires Damaso M, Osmanović D, Reboul CF, Dunstone MA, Andrew PW, Lonnen R, Topf M, Saibil HR, Hoogenboom BW. Leung C, et al. Among authors: pandurangan ap. Elife. 2014 Dec 2;3:e04247. doi: 10.7554/eLife.04247. Elife. 2014. PMID: 25457051 Free PMC article.

2

Finding rigid bodies in protein structures: Application to flexible fitting into cryoEM maps.

Pandurangan AP, Topf M. Pandurangan AP, et al. J Struct Biol. 2012 Feb;177(2):520-31. doi: 10.1016/j.jsb.2011.10.011. Epub 2011 Nov 7. J Struct Biol. 2012. PMID: 22079400

3

RIBFIND: a web server for identifying rigid bodies in protein structures and to aid flexible fitting into cryo EM maps.

Pandurangan AP, Topf M. Pandurangan AP, et al. Bioinformatics. 2012 Sep 15;28(18):2391-3. doi: 10.1093/bioinformatics/bts446. Epub 2012 Jul 12. Bioinformatics. 2012. PMID: 22796953

4

Combined approaches to flexible fitting and assessment in virus capsids undergoing conformational change.

Pandurangan AP, Shakeel S, Butcher SJ, Topf M. Pandurangan AP, et al. J Struct Biol. 2014 Mar;185(3):427-39. doi: 10.1016/j.jsb.2013.12.003. Epub 2013 Dec 12. J Struct Biol. 2014. PMID: 24333899 Free PMC article.

5

Conformational States of macromolecular assemblies explored by integrative structure calculation.

Thalassinos K, Pandurangan AP, Xu M, Alber F, Topf M. Thalassinos K, et al. Among authors: pandurangan ap. Structure. 2013 Sep 3;21(9):1500-8. doi: 10.1016/j.str.2013.08.006. Structure. 2013. PMID: 24010709 Free PMC article.

6

TEMPy: a Python library for assessment of three-dimensional electron microscopy density fits.

Farabella I, Vasishtan D, Joseph AP, Pandurangan AP, Sahota H, Topf M. Farabella I, et al. Among authors: pandurangan ap. J Appl Crystallogr. 2015 Jun 27;48(Pt 4):1314-1323. doi: 10.1107/S1600576715010092. eCollection 2015 Aug 1. J Appl Crystallogr. 2015. PMID: 26306092 Free PMC article.

7

γ-TEMPy: Simultaneous Fitting of Components in 3D-EM Maps of Their Assembly Using a Genetic Algorithm.

Pandurangan AP, Vasishtan D, Alber F, Topf M. Pandurangan AP, et al. Structure. 2015 Dec 1;23(12):2365-2376. doi: 10.1016/j.str.2015.10.013. Epub 2015 Nov 19. Structure. 2015. PMID: 26655474 Free PMC article.

8

Photo-antagonism of the GABAA receptor.

Mortensen M, Iqbal F, Pandurangan AP, Hannan S, Huckvale R, Topf M, Baker JR, Smart TG. Mortensen M, et al. Among authors: pandurangan ap. Nat Commun. 2014 Jul 29;5:4454. doi: 10.1038/ncomms5454. Nat Commun. 2014. PMID: 25072879 Free PMC article.

9

The structure of herpesvirus fusion glycoprotein B-bilayer complex reveals the protein-membrane and lateral protein-protein interaction.

Maurer UE, Zeev-Ben-Mordehai T, Pandurangan AP, Cairns TM, Hannah BP, Whitbeck JC, Eisenberg RJ, Cohen GH, Topf M, Huiskonen JT, Grünewald K. Maurer UE, et al. Among authors: pandurangan ap. Structure. 2013 Aug 6;21(8):1396-405. doi: 10.1016/j.str.2013.05.018. Epub 2013 Jul 11. Structure. 2013. PMID: 23850455 Free PMC article.

10

Structural analysis of coxsackievirus A7 reveals conformational changes associated with uncoating.

Seitsonen JJ, Shakeel S, Susi P, Pandurangan AP, Sinkovits RS, Hyvönen H, Laurinmäki P, Ylä-Pelto J, Topf M, Hyypiä T, Butcher SJ. Seitsonen JJ, et al. Among authors: pandurangan ap. J Virol. 2012 Jul;86(13):7207-15. doi: 10.1128/JVI.06425-11. Epub 2012 Apr 18. J Virol. 2012. PMID: 22514349 Free PMC article.

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