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An ontology for microbial phenotypes.
Chibucos MC, Zweifel AE, Herrera JC, Meza W, Eslamfam S, Uetz P, Siegele DA, Hu JC, Giglio MG. Chibucos MC, et al. Among authors: hu jc. BMC Microbiol. 2014 Nov 30;14:294. doi: 10.1186/s12866-014-0294-3. BMC Microbiol. 2014. PMID: 25433798 Free PMC article.
ECO, the Evidence & Conclusion Ontology: community standard for evidence information.
Giglio M, Tauber R, Nadendla S, Munro J, Olley D, Ball S, Mitraka E, Schriml LM, Gaudet P, Hobbs ET, Erill I, Siegele DA, Hu JC, Mungall C, Chibucos MC. Giglio M, et al. Among authors: hu jc. Nucleic Acids Res. 2019 Jan 8;47(D1):D1186-D1194. doi: 10.1093/nar/gky1036. Nucleic Acids Res. 2019. PMID: 30407590 Free PMC article.
Phenotype annotation with the ontology of microbial phenotypes (OMP).
Siegele DA, LaBonte SA, Wu PI, Chibucos MC, Nandendla S, Giglio MG, Hu JC. Siegele DA, et al. Among authors: hu jc. J Biomed Semantics. 2019 Jul 15;10(1):13. doi: 10.1186/s13326-019-0205-5. J Biomed Semantics. 2019. PMID: 31307550 Free PMC article.
EcoliWiki: a wiki-based community resource for Escherichia coli.
McIntosh BK, Renfro DP, Knapp GS, Lairikyengbam CR, Liles NM, Niu L, Supak AM, Venkatraman A, Zweifel AE, Siegele DA, Hu JC. McIntosh BK, et al. Among authors: hu jc. Nucleic Acids Res. 2012 Jan;40(Database issue):D1270-7. doi: 10.1093/nar/gkr880. Epub 2011 Nov 7. Nucleic Acids Res. 2012. PMID: 22064863 Free PMC article.
GONUTS: the Gene Ontology Normal Usage Tracking System.
Renfro DP, McIntosh BK, Venkatraman A, Siegele DA, Hu JC. Renfro DP, et al. Among authors: hu jc. Nucleic Acids Res. 2012 Jan;40(Database issue):D1262-9. doi: 10.1093/nar/gkr907. Epub 2011 Nov 22. Nucleic Acids Res. 2012. PMID: 22110029 Free PMC article.
The Gene Ontology in 2010: extensions and refinements.
Gene Ontology Consortium. Gene Ontology Consortium. Nucleic Acids Res. 2010 Jan;38(Database issue):D331-5. doi: 10.1093/nar/gkp1018. Epub 2009 Nov 17. Nucleic Acids Res. 2010. PMID: 19920128 Free PMC article.
Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO).
Ramsey J, McIntosh B, Renfro D, Aleksander SA, LaBonte S, Ross C, Zweifel AE, Liles N, Farrar S, Gill JJ, Erill I, Ades S, Berardini TZ, Bennett JA, Brady S, Britton R, Carbon S, Caruso SM, Clements D, Dalia R, Defelice M, Doyle EL, Friedberg I, Gurney SMR, Hughes L, Johnson A, Kowalski JM, Li D, Lovering RC, Mans TL, McCarthy F, Moore SD, Murphy R, Paustian TD, Perdue S, Peterson CN, Prüß BM, Saha MS, Sheehy RR, Tansey JT, Temple L, Thorman AW, Trevino S, Vollmer AC, Walbot V, Willey J, Siegele DA, Hu JC. Ramsey J, et al. Among authors: hu jc. PLoS Comput Biol. 2021 Oct 28;17(10):e1009463. doi: 10.1371/journal.pcbi.1009463. eCollection 2021 Oct. PLoS Comput Biol. 2021. PMID: 34710081 Free PMC article.
933 results