Basha O - Search Results

1

A combination of gene expression ranking and co-expression network analysis increases discovery rate in large-scale mutant screens for novel Arabidopsis thaliana abiotic stress genes.

Ransbotyn V, Yeger-Lotem E, Basha O, Acuna T, Verduyn C, Gordon M, Chalifa-Caspi V, Hannah MA, Barak S. Ransbotyn V, et al. Among authors: basha o. Plant Biotechnol J. 2015 May;13(4):501-13. doi: 10.1111/pbi.12274. Epub 2014 Nov 5. Plant Biotechnol J. 2015. PMID: 25370817 Free article.

2

The TissueNet database of human tissue protein-protein interactions.

Barshir R, Basha O, Eluk A, Smoly IY, Lan A, Yeger-Lotem E. Barshir R, et al. Among authors: basha o. Nucleic Acids Res. 2013 Jan;41(Database issue):D841-4. doi: 10.1093/nar/gks1198. Epub 2012 Nov 27. Nucleic Acids Res. 2013. PMID: 23193266 Free PMC article.

3

ResponseNet2.0: Revealing signaling and regulatory pathways connecting your proteins and genes--now with human data.

Basha O, Tirman S, Eluk A, Yeger-Lotem E. Basha O, et al. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W198-203. doi: 10.1093/nar/gkt532. Epub 2013 Jun 12. Nucleic Acids Res. 2013. PMID: 23761447 Free PMC article.

4

MyProteinNet: build up-to-date protein interaction networks for organisms, tissues and user-defined contexts.

Basha O, Flom D, Barshir R, Smoly I, Tirman S, Yeger-Lotem E. Basha O, et al. Nucleic Acids Res. 2015 Jul 1;43(W1):W258-63. doi: 10.1093/nar/gkv515. Epub 2015 May 18. Nucleic Acids Res. 2015. PMID: 25990735 Free PMC article.

5

The TissueNet v.2 database: A quantitative view of protein-protein interactions across human tissues.

Basha O, Barshir R, Sharon M, Lerman E, Kirson BF, Hekselman I, Yeger-Lotem E. Basha O, et al. Nucleic Acids Res. 2017 Jan 4;45(D1):D427-D431. doi: 10.1093/nar/gkw1088. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899616 Free PMC article.

6

The DifferentialNet database of differential protein-protein interactions in human tissues.

Basha O, Shpringer R, Argov CM, Yeger-Lotem E. Basha O, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D522-D526. doi: 10.1093/nar/gkx981. Nucleic Acids Res. 2018. PMID: 29069447 Free PMC article.

7

RSRC1 mutation affects intellect and behaviour through aberrant splicing and transcription, downregulating IGFBP3.

Perez Y, Menascu S, Cohen I, Kadir R, Basha O, Shorer Z, Romi H, Meiri G, Rabinski T, Ofir R, Yeger-Lotem E, Birk OS. Perez Y, et al. Among authors: basha o. Brain. 2018 Apr 1;141(4):961-970. doi: 10.1093/brain/awy045. Brain. 2018. PMID: 29522154

8

Integrating Rio1 activities discloses its nutrient-activated network in Saccharomyces cerevisiae.

Iacovella MG, Bremang M, Basha O, Giacò L, Carotenuto W, Golfieri C, Szakal B, Dal Maschio M, Infantino V, Beznoussenko GV, Joseph CR, Visintin C, Mironov AA, Visintin R, Branzei D, Ferreira-Cerca S, Yeger-Lotem E, De Wulf P. Iacovella MG, et al. Among authors: basha o. Nucleic Acids Res. 2018 Sep 6;46(15):7586-7611. doi: 10.1093/nar/gky618. Nucleic Acids Res. 2018. PMID: 30011030 Free PMC article.

9

ResponseNet v.3: revealing signaling and regulatory pathways connecting your proteins and genes across human tissues.

Basha O, Mauer O, Simonovsky E, Shpringer R, Yeger-Lotem E. Basha O, et al. Nucleic Acids Res. 2019 Jul 2;47(W1):W242-W247. doi: 10.1093/nar/gkz421. Nucleic Acids Res. 2019. PMID: 31114913 Free PMC article.

10

Differential network analysis of multiple human tissue interactomes highlights tissue-selective processes and genetic disorder genes.

Basha O, Argov CM, Artzy R, Zoabi Y, Hekselman I, Alfandari L, Chalifa-Caspi V, Yeger-Lotem E. Basha O, et al. Bioinformatics. 2020 May 1;36(9):2821-2828. doi: 10.1093/bioinformatics/btaa034. Bioinformatics. 2020. PMID: 31960892

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