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S-nitrosylation-mediated redox transcriptional switch modulates neurogenesis and neuronal cell death.
Okamoto S, Nakamura T, Cieplak P, Chan SF, Kalashnikova E, Liao L, Saleem S, Han X, Clemente A, Nutter A, Sances S, Brechtel C, Haus D, Haun F, Sanz-Blasco S, Huang X, Li H, Zaremba JD, Cui J, Gu Z, Nikzad R, Harrop A, McKercher SR, Godzik A, Yates JR 3rd, Lipton SA. Okamoto S, et al. Among authors: cieplak p. Cell Rep. 2014 Jul 10;8(1):217-28. doi: 10.1016/j.celrep.2014.06.005. Epub 2014 Jul 4. Cell Rep. 2014. PMID: 25001280 Free PMC article.
Optimal Scheme to Achieve Energy Conservation in Induced Dipole Models.
Huang Z, Zhao S, Cieplak P, Duan Y, Luo R, Wei H. Huang Z, et al. Among authors: cieplak p. J Chem Theory Comput. 2023 Aug 8;19(15):5047-5057. doi: 10.1021/acs.jctc.3c00226. Epub 2023 Jul 13. J Chem Theory Comput. 2023. PMID: 37441805 Free PMC article.
Structural determinants of limited proteolysis.
Kazanov MD, Igarashi Y, Eroshkin AM, Cieplak P, Ratnikov B, Zhang Y, Li Z, Godzik A, Osterman AL, Smith JW. Kazanov MD, et al. Among authors: cieplak p. J Proteome Res. 2011 Aug 5;10(8):3642-51. doi: 10.1021/pr200271w. Epub 2011 Jul 8. J Proteome Res. 2011. PMID: 21682278 Free PMC article.
Basis for substrate recognition and distinction by matrix metalloproteinases.
Ratnikov BI, Cieplak P, Gramatikoff K, Pierce J, Eroshkin A, Igarashi Y, Kazanov M, Sun Q, Godzik A, Osterman A, Stec B, Strongin A, Smith JW. Ratnikov BI, et al. Among authors: cieplak p. Proc Natl Acad Sci U S A. 2014 Oct 7;111(40):E4148-55. doi: 10.1073/pnas.1406134111. Epub 2014 Sep 22. Proc Natl Acad Sci U S A. 2014. PMID: 25246591 Free PMC article.
PMAP: databases for analyzing proteolytic events and pathways.
Igarashi Y, Heureux E, Doctor KS, Talwar P, Gramatikova S, Gramatikoff K, Zhang Y, Blinov M, Ibragimova SS, Boyd S, Ratnikov B, Cieplak P, Godzik A, Smith JW, Osterman AL, Eroshkin AM. Igarashi Y, et al. Among authors: cieplak p. Nucleic Acids Res. 2009 Jan;37(Database issue):D611-8. doi: 10.1093/nar/gkn683. Epub 2008 Oct 8. Nucleic Acids Res. 2009. PMID: 18842634 Free PMC article.
97 results