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Comparative validation of the D. melanogaster modENCODE transcriptome annotation.
Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, Clough E, Dasgupta A, Gubbala S, Han Y, Jayaseelan JC, Kalra D, Kim YA, Kovar CL, Lee SL, Li M, Malley JD, Malone JH, Mathew T, Mattiuzzo NR, Munidasa M, Muzny DM, Ongeri F, Perales L, Przytycka TM, Pu LL, Robinson G, Thornton RL, Saada N, Scherer SE, Smith HE, Vinson C, Warner CB, Worley KC, Wu YQ, Zou X, Cherbas P, Kellis M, Eisen MB, Piano F, Kionte K, Fitch DH, Sternberg PW, Cutter AD, Duff MO, Hoskins RA, Graveley BR, Gibbs RA, Bickel PJ, Kopp A, Carninci P, Celniker SE, Oliver B, Richards S. Chen ZX, et al. Among authors: kim ya. Genome Res. 2014 Jul;24(7):1209-23. doi: 10.1101/gr.159384.113. Genome Res. 2014. PMID: 24985915 Free PMC article.
Network integration meets network dynamics.
Przytycka TM, Kim YA. Przytycka TM, et al. Among authors: kim ya. BMC Biol. 2010 Apr 28;8:48. doi: 10.1186/1741-7007-8-48. BMC Biol. 2010. PMID: 20513250 Free PMC article.
Modeling information flow in biological networks.
Kim YA, Przytycki JH, Wuchty S, Przytycka TM. Kim YA, et al. Phys Biol. 2011 Jun;8(3):035012. doi: 10.1088/1478-3975/8/3/035012. Epub 2011 May 13. Phys Biol. 2011. PMID: 21572171 Free PMC article. Review.
Chapter 5: Network biology approach to complex diseases.
Cho DY, Kim YA, Przytycka TM. Cho DY, et al. Among authors: kim ya. PLoS Comput Biol. 2012;8(12):e1002820. doi: 10.1371/journal.pcbi.1002820. Epub 2012 Dec 27. PLoS Comput Biol. 2012. PMID: 23300411 Free PMC article.
946 results