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Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea.
Parkin IA, Koh C, Tang H, Robinson SJ, Kagale S, Clarke WE, Town CD, Nixon J, Krishnakumar V, Bidwell SL, Denoeud F, Belcram H, Links MG, Just J, Clarke C, Bender T, Huebert T, Mason AS, Pires JC, Barker G, Moore J, Walley PG, Manoli S, Batley J, Edwards D, Nelson MN, Wang X, Paterson AH, King G, Bancroft I, Chalhoub B, Sharpe AG. Parkin IA, et al. Among authors: moore j. Genome Biol. 2014 Jun 10;15(6):R77. doi: 10.1186/gb-2014-15-6-r77. Genome Biol. 2014. PMID: 24916971 Free PMC article.
Genetic regulation of glucoraphanin accumulation in Beneforté broccoli.
Traka MH, Saha S, Huseby S, Kopriva S, Walley PG, Barker GC, Moore J, Mero G, van den Bosch F, Constant H, Kelly L, Schepers H, Boddupalli S, Mithen RF. Traka MH, et al. Among authors: moore j. New Phytol. 2013 Jun;198(4):1085-1095. doi: 10.1111/nph.12232. Epub 2013 Apr 8. New Phytol. 2013. PMID: 23560984 Free PMC article.
The Evolutionary History of Wild, Domesticated, and Feral Brassica oleracea (Brassicaceae).
Mabry ME, Turner-Hissong SD, Gallagher EY, McAlvay AC, An H, Edger PP, Moore JD, Pink DAC, Teakle GR, Stevens CJ, Barker G, Labate J, Fuller DQ, Allaby RG, Beissinger T, Decker JE, Gore MA, Pires JC. Mabry ME, et al. Among authors: moore jd. Mol Biol Evol. 2021 Sep 27;38(10):4419-4434. doi: 10.1093/molbev/msab183. Mol Biol Evol. 2021. PMID: 34157722 Free PMC article.
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston V. Breeze E, et al. Among authors: moore jd. Plant Cell. 2011 Mar;23(3):873-94. doi: 10.1105/tpc.111.083345. Epub 2011 Mar 29. Plant Cell. 2011. PMID: 21447789 Free PMC article.
Arabidopsis defense against Botrytis cinerea: chronology and regulation deciphered by high-resolution temporal transcriptomic analysis.
Windram O, Madhou P, McHattie S, Hill C, Hickman R, Cooke E, Jenkins DJ, Penfold CA, Baxter L, Breeze E, Kiddle SJ, Rhodes J, Atwell S, Kliebenstein DJ, Kim YS, Stegle O, Borgwardt K, Zhang C, Tabrett A, Legaie R, Moore J, Finkenstadt B, Wild DL, Mead A, Rand D, Beynon J, Ott S, Buchanan-Wollaston V, Denby KJ. Windram O, et al. Among authors: moore j. Plant Cell. 2012 Sep;24(9):3530-57. doi: 10.1105/tpc.112.102046. Epub 2012 Sep 28. Plant Cell. 2012. PMID: 23023172 Free PMC article.
Changes in Gene Expression in Space and Time Orchestrate Environmentally Mediated Shaping of Root Architecture.
Walker L, Boddington C, Jenkins D, Wang Y, Grønlund JT, Hulsmans J, Kumar S, Patel D, Moore JD, Carter A, Samavedam S, Bonomo G, Hersh DS, Coruzzi GM, Burroughs NJ, Gifford ML. Walker L, et al. Among authors: moore jd. Plant Cell. 2017 Oct;29(10):2393-2412. doi: 10.1105/tpc.16.00961. Epub 2017 Sep 11. Plant Cell. 2017. PMID: 28893852 Free PMC article.
Time-series transcriptomics reveals a BBX32-directed control of acclimation to high light in mature Arabidopsis leaves.
Alvarez-Fernandez R, Penfold CA, Galvez-Valdivieso G, Exposito-Rodriguez M, Stallard EJ, Bowden L, Moore JD, Mead A, Davey PA, Matthews JSA, Beynon J, Buchanan-Wollaston V, Wild DL, Lawson T, Bechtold U, Denby KJ, Mullineaux PM. Alvarez-Fernandez R, et al. Among authors: moore jd. Plant J. 2021 Sep;107(5):1363-1386. doi: 10.1111/tpj.15384. Epub 2021 Aug 6. Plant J. 2021. PMID: 34160110 Free article.
A local regulatory network around three NAC transcription factors in stress responses and senescence in Arabidopsis leaves.
Hickman R, Hill C, Penfold CA, Breeze E, Bowden L, Moore JD, Zhang P, Jackson A, Cooke E, Bewicke-Copley F, Mead A, Beynon J, Wild DL, Denby KJ, Ott S, Buchanan-Wollaston V. Hickman R, et al. Among authors: moore jd. Plant J. 2013 Jul;75(1):26-39. doi: 10.1111/tpj.12194. Epub 2013 May 11. Plant J. 2013. PMID: 23578292 Free PMC article.
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