De Paoli E - Search Results

1

Sample sequencing of vascular plants demonstrates widespread conservation and divergence of microRNAs.

Chávez Montes RA, de Fátima Rosas-Cárdenas F, De Paoli E, Accerbi M, Rymarquis LA, Mahalingam G, Marsch-Martínez N, Meyers BC, Green PJ, de Folter S. Chávez Montes RA, et al. Among authors: de fatima rosas cardenas f, de paoli e, de folter s. Nat Commun. 2014 Apr 23;5:3722. doi: 10.1038/ncomms4722. Nat Commun. 2014. PMID: 24759728 Free article.

2

Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends.

German MA, Pillay M, Jeong DH, Hetawal A, Luo S, Janardhanan P, Kannan V, Rymarquis LA, Nobuta K, German R, De Paoli E, Lu C, Schroth G, Meyers BC, Green PJ. German MA, et al. Among authors: de paoli e. Nat Biotechnol. 2008 Aug;26(8):941-6. doi: 10.1038/nbt1417. Epub 2008 Jun 9. Nat Biotechnol. 2008. PMID: 18542052

3

Distinct size distribution of endogeneous siRNAs in maize: Evidence from deep sequencing in the mop1-1 mutant.

Nobuta K, Lu C, Shrivastava R, Pillay M, De Paoli E, Accerbi M, Arteaga-Vazquez M, Sidorenko L, Jeong DH, Yen Y, Green PJ, Chandler VL, Meyers BC. Nobuta K, et al. Among authors: de paoli e. Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14958-63. doi: 10.1073/pnas.0808066105. Epub 2008 Sep 24. Proc Natl Acad Sci U S A. 2008. PMID: 18815367 Free PMC article.

4

Methods for isolation of total RNA to recover miRNAs and other small RNAs from diverse species.

Accerbi M, Schmidt SA, De Paoli E, Park S, Jeong DH, Green PJ. Accerbi M, et al. Among authors: de paoli e. Methods Mol Biol. 2010;592:31-50. doi: 10.1007/978-1-60327-005-2_3. Methods Mol Biol. 2010. PMID: 19802587

5

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs.

Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, González AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC. Zhai J, et al. Among authors: de paoli e. Genes Dev. 2011 Dec 1;25(23):2540-53. doi: 10.1101/gad.177527.111. Genes Dev. 2011. PMID: 22156213 Free PMC article.

6

Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.

Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ. Jeong DH, et al. Among authors: de paoli e. Plant Cell. 2011 Dec;23(12):4185-207. doi: 10.1105/tpc.111.089045. Epub 2011 Dec 9. Plant Cell. 2011. PMID: 22158467 Free PMC article.

7

Distinct extremely abundant siRNAs associated with cosuppression in petunia.

De Paoli E, Dorantes-Acosta A, Zhai J, Accerbi M, Jeong DH, Park S, Meyers BC, Jorgensen RA, Green PJ. De Paoli E, et al. RNA. 2009 Nov;15(11):1965-70. doi: 10.1261/rna.1706109. Epub 2009 Sep 23. RNA. 2009. PMID: 19776157 Free PMC article.

8

The tomato genome sequence provides insights into fleshy fruit evolution.

Tomato Genome Consortium. Tomato Genome Consortium. Nature. 2012 May 30;485(7400):635-41. doi: 10.1038/nature11119. Nature. 2012. PMID: 22660326 Free PMC article.

9

The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea.

Olsen JL, Rouzé P, Verhelst B, Lin YC, Bayer T, Collen J, Dattolo E, De Paoli E, Dittami S, Maumus F, Michel G, Kersting A, Lauritano C, Lohaus R, Töpel M, Tonon T, Vanneste K, Amirebrahimi M, Brakel J, Boström C, Chovatia M, Grimwood J, Jenkins JW, Jueterbock A, Mraz A, Stam WT, Tice H, Bornberg-Bauer E, Green PJ, Pearson GA, Procaccini G, Duarte CM, Schmutz J, Reusch TB, Van de Peer Y. Olsen JL, et al. Among authors: de paoli e. Nature. 2016 Feb 18;530(7590):331-5. doi: 10.1038/nature16548. Epub 2016 Jan 27. Nature. 2016. PMID: 26814964 Free article.

10

Genomic and small RNA sequencing of Miscanthus x giganteus shows the utility of sorghum as a reference genome sequence for Andropogoneae grasses.

Swaminathan K, Alabady MS, Varala K, De Paoli E, Ho I, Rokhsar DS, Arumuganathan AK, Ming R, Green PJ, Meyers BC, Moose SP, Hudson ME. Swaminathan K, et al. Among authors: de paoli e. Genome Biol. 2010;11(2):R12. doi: 10.1186/gb-2010-11-2-r12. Epub 2010 Feb 3. Genome Biol. 2010. PMID: 20128909 Free PMC article.

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