Poptsova MS - Search Results

1

Non-random DNA fragmentation in next-generation sequencing.

Poptsova MS, Il'icheva IA, Nechipurenko DY, Panchenko LA, Khodikov MV, Oparina NY, Polozov RV, Nechipurenko YD, Grokhovsky SL. Poptsova MS, et al. Sci Rep. 2014 Mar 31;4:4532. doi: 10.1038/srep04532. Sci Rep. 2014. PMID: 24681819 Free PMC article.

2

Structural features of DNA that determine RNA polymerase II core promoter.

Il'icheva IA, Khodikov MV, Poptsova MS, Nechipurenko DY, Nechipurenko YD, Grokhovsky SL. Il'icheva IA, et al. Among authors: poptsova ms. BMC Genomics. 2016 Nov 25;17(1):973. doi: 10.1186/s12864-016-3292-z. BMC Genomics. 2016. PMID: 27884105 Free PMC article.

3

[Modeling of mechanochemical DNA cleavage by action of ultrasound].

Nechupurenko DIu, Il'icheva IA, Khodykov MV, Poptsova MS, Nechipurenko IuD, Grokhovskiĭ SL. Nechupurenko DIu, et al. Among authors: poptsova ms. Biofizika. 2014 Nov-Dec;59(6):1061-70. Biofizika. 2014. PMID: 25715610 Russian.

4

Deep learning approach for predicting functional Z-DNA regions using omics data.

Beknazarov N, Jin S, Poptsova M. Beknazarov N, et al. Sci Rep. 2020 Nov 5;10(1):19134. doi: 10.1038/s41598-020-76203-1. Sci Rep. 2020. PMID: 33154517 Free PMC article.

5

Recognition of 3'-end L1, Alu, processed pseudogenes, and mRNA stem-loops in the human genome using sequence-based and structure-based machine-learning models.

Shein A, Zaikin A, Poptsova M. Shein A, et al. Sci Rep. 2019 May 10;9(1):7211. doi: 10.1038/s41598-019-43403-3. Sci Rep. 2019. PMID: 31076573 Free PMC article.

6

Conserved 3' UTR stem-loop structure in L1 and Alu transposons in human genome: possible role in retrotransposition.

Grechishnikova D, Poptsova M. Grechishnikova D, et al. BMC Genomics. 2016 Dec 3;17(1):992. doi: 10.1186/s12864-016-3344-4. BMC Genomics. 2016. PMID: 27914481 Free PMC article.

7

ADAR1 masks the cancer immunotherapeutic promise of ZBP1-driven necroptosis.

Zhang T, Yin C, Fedorov A, Qiao L, Bao H, Beknazarov N, Wang S, Gautam A, Williams RM, Crawford JC, Peri S, Studitsky V, Beg AA, Thomas PG, Walkley C, Xu Y, Poptsova M, Herbert A, Balachandran S. Zhang T, et al. Nature. 2022 Jun;606(7914):594-602. doi: 10.1038/s41586-022-04753-7. Epub 2022 May 25. Nature. 2022. PMID: 35614224 Free PMC article.

8

Interethnic differences in the prevalence of main cardiovascular pharmacogenetic biomarkers.

Mirzaev K, Abdullaev S, Akmalova K, Sozaeva J, Grishina E, Shuev G, Bolieva L, Sozaeva M, Zhuchkova S, Gimaldinova N, Sidukova E, Serebrova S, Asoskova A, Shein A, Poptsova M, Suleymanov S, Burashnikova I, Shikaleva A, Kachanova A, Fedorinov D, Sychev D. Mirzaev K, et al. Pharmacogenomics. 2020 Jul;21(10):677-694. doi: 10.2217/pgs-2020-0005. Epub 2020 Jun 16. Pharmacogenomics. 2020. PMID: 32539557

9

Tissue-specific impact of stem-loops and quadruplexes on cancer breakpoints formation.

Cheloshkina K, Poptsova M. Cheloshkina K, et al. BMC Cancer. 2019 May 10;19(1):434. doi: 10.1186/s12885-019-5653-x. BMC Cancer. 2019. PMID: 31077166 Free PMC article.

10

Comprehensive analysis of cancer breakpoints reveals signatures of genetic and epigenetic contribution to cancer genome rearrangements.

Cheloshkina K, Poptsova M. Cheloshkina K, et al. PLoS Comput Biol. 2021 Mar 1;17(3):e1008749. doi: 10.1371/journal.pcbi.1008749. eCollection 2021 Mar. PLoS Comput Biol. 2021. PMID: 33647036 Free PMC article.

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