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Fitness costs of rifampicin resistance in Mycobacterium tuberculosis are amplified under conditions of nutrient starvation and compensated by mutation in the β' subunit of RNA polymerase.
Song T, Park Y, Shamputa IC, Seo S, Lee SY, Jeon HS, Choi H, Lee M, Glynne RJ, Barnes SW, Walker JR, Batalov S, Yusim K, Feng S, Tung CS, Theiler J, Via LE, Boshoff HI, Murakami KS, Korber B, Barry CE 3rd, Cho SN. Song T, et al. Among authors: yusim k. Mol Microbiol. 2014 Mar;91(6):1106-19. doi: 10.1111/mmi.12520. Epub 2014 Feb 26. Mol Microbiol. 2014. PMID: 24417450 Free PMC article.
Immunoinformatics comes of age.
Korber B, LaBute M, Yusim K. Korber B, et al. Among authors: yusim k. PLoS Comput Biol. 2006 Jun 30;2(6):e71. doi: 10.1371/journal.pcbi.0020071. PLoS Comput Biol. 2006. PMID: 16846250 Free PMC article. Review.
Web-based design and evaluation of T-cell vaccine candidates.
Thurmond J, Yoon H, Kuiken C, Yusim K, Perkins S, Theiler J, Bhattacharya T, Korber B, Fischer W. Thurmond J, et al. Among authors: yusim k. Bioinformatics. 2008 Jul 15;24(14):1639-40. doi: 10.1093/bioinformatics/btn251. Epub 2008 May 29. Bioinformatics. 2008. PMID: 18515277
A multivalent clade C HIV-1 Env trimer cocktail elicits a higher magnitude of neutralizing antibodies than any individual component.
Bricault CA, Kovacs JM, Nkolola JP, Yusim K, Giorgi EE, Shields JL, Perry J, Lavine CL, Cheung A, Ellingson-Strouss K, Rademeyer C, Gray GE, Williamson C, Stamatatos L, Seaman MS, Korber BT, Chen B, Barouch DH. Bricault CA, et al. Among authors: yusim k. J Virol. 2015 Mar;89(5):2507-19. doi: 10.1128/JVI.03331-14. Epub 2014 Dec 24. J Virol. 2015. PMID: 25540368 Free PMC article.
Integrated sequence and immunology filovirus database at Los Alamos.
Yusim K, Yoon H, Foley B, Feng S, Macke J, Dimitrijevic M, Abfalterer W, Szinger J, Fischer W, Kuiken C, Korber B. Yusim K, et al. Database (Oxford). 2016 Apr 21;2016:baw047. doi: 10.1093/database/baw047. Print 2016. Database (Oxford). 2016. PMID: 27103629 Free PMC article.
47 results