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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.
Caspi R, Altman T, Billington R, Dreher K, Foerster H, Fulcher CA, Holland TA, Keseler IM, Kothari A, Kubo A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Subhraveti P, Weaver DS, Weerasinghe D, Zhang P, Karp PD. Caspi R, et al. Among authors: mueller la. Nucleic Acids Res. 2014 Jan;42(Database issue):D459-71. doi: 10.1093/nar/gkt1103. Epub 2013 Nov 12. Nucleic Acids Res. 2014. PMID: 24225315 Free PMC article.
The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant.
Huala E, Dickerman AW, Garcia-Hernandez M, Weems D, Reiser L, LaFond F, Hanley D, Kiphart D, Zhuang M, Huang W, Mueller LA, Bhattacharyya D, Bhaya D, Sobral BW, Beavis W, Meinke DW, Town CD, Somerville C, Rhee SY. Huala E, et al. Among authors: mueller la. Nucleic Acids Res. 2001 Jan 1;29(1):102-5. doi: 10.1093/nar/29.1.102. Nucleic Acids Res. 2001. PMID: 11125061 Free PMC article.
TAIR: a resource for integrated Arabidopsis data.
Garcia-Hernandez M, Berardini TZ, Chen G, Crist D, Doyle A, Huala E, Knee E, Lambrecht M, Miller N, Mueller LA, Mundodi S, Reiser L, Rhee SY, Scholl R, Tacklind J, Weems DC, Wu Y, Xu I, Yoo D, Yoon J, Zhang P. Garcia-Hernandez M, et al. Among authors: mueller la. Funct Integr Genomics. 2002 Nov;2(6):239-53. doi: 10.1007/s10142-002-0077-z. Epub 2002 Oct 3. Funct Integr Genomics. 2002. PMID: 12444417 Review.
The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community.
Rhee SY, Beavis W, Berardini TZ, Chen G, Dixon D, Doyle A, Garcia-Hernandez M, Huala E, Lander G, Montoya M, Miller N, Mueller LA, Mundodi S, Reiser L, Tacklind J, Weems DC, Wu Y, Xu I, Yoo D, Yoon J, Zhang P. Rhee SY, et al. Among authors: mueller la. Nucleic Acids Res. 2003 Jan 1;31(1):224-8. doi: 10.1093/nar/gkg076. Nucleic Acids Res. 2003. PMID: 12519987 Free PMC article.
MetaCyc: a multiorganism database of metabolic pathways and enzymes.
Krieger CJ, Zhang P, Mueller LA, Wang A, Paley S, Arnaud M, Pick J, Rhee SY, Karp PD. Krieger CJ, et al. Among authors: mueller la. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D438-42. doi: 10.1093/nar/gkh100. Nucleic Acids Res. 2004. PMID: 14681452 Free PMC article.
Functional annotation of the Arabidopsis genome using controlled vocabularies.
Berardini TZ, Mundodi S, Reiser L, Huala E, Garcia-Hernandez M, Zhang P, Mueller LA, Yoon J, Doyle A, Lander G, Moseyko N, Yoo D, Xu I, Zoeckler B, Montoya M, Miller N, Weems D, Rhee SY. Berardini TZ, et al. Among authors: mueller la. Plant Physiol. 2004 Jun;135(2):745-55. doi: 10.1104/pp.104.040071. Epub 2004 Jun 1. Plant Physiol. 2004. PMID: 15173566 Free PMC article.
Querying and computing with BioCyc databases.
Krummenacker M, Paley S, Mueller L, Yan T, Karp PD. Krummenacker M, et al. Bioinformatics. 2005 Aug 15;21(16):3454-5. doi: 10.1093/bioinformatics/bti546. Epub 2005 Jun 16. Bioinformatics. 2005. PMID: 15961440 Free PMC article.
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases.
Caspi R, Altman T, Dale JM, Dreher K, Fulcher CA, Gilham F, Kaipa P, Karthikeyan AS, Kothari A, Krummenacker M, Latendresse M, Mueller LA, Paley S, Popescu L, Pujar A, Shearer AG, Zhang P, Karp PD. Caspi R, et al. Among authors: mueller la. Nucleic Acids Res. 2010 Jan;38(Database issue):D473-9. doi: 10.1093/nar/gkp875. Epub 2009 Oct 22. Nucleic Acids Res. 2010. PMID: 19850718 Free PMC article.
186 results