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Tracking the establishment of local endemic populations of an emergent enteric pathogen.
Holt KE, Thieu Nga TV, Thanh DP, Vinh H, Kim DW, Vu Tra MP, Campbell JI, Hoang NV, Vinh NT, Minh PV, Thuy CT, Nga TT, Thompson C, Dung TT, Nhu NT, Vinh PV, Tuyet PT, Phuc HL, Lien NT, Phu BD, Ai NT, Tien NM, Dong N, Parry CM, Hien TT, Farrar JJ, Parkhill J, Dougan G, Thomson NR, Baker S. Holt KE, et al. Among authors: kim dw. Proc Natl Acad Sci U S A. 2013 Oct 22;110(43):17522-7. doi: 10.1073/pnas.1308632110. Epub 2013 Sep 30. Proc Natl Acad Sci U S A. 2013. PMID: 24082120 Free PMC article.
Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe.
Holt KE, Baker S, Weill FX, Holmes EC, Kitchen A, Yu J, Sangal V, Brown DJ, Coia JE, Kim DW, Choi SY, Kim SH, da Silveira WD, Pickard DJ, Farrar JJ, Parkhill J, Dougan G, Thomson NR. Holt KE, et al. Among authors: kim dw, kim sh. Nat Genet. 2012 Sep;44(9):1056-9. doi: 10.1038/ng.2369. Epub 2012 Aug 5. Nat Genet. 2012. PMID: 22863732 Free PMC article.
Global phylogeny of Shigella sonnei strains from limited single nucleotide polymorphisms (SNPs) and development of a rapid and cost-effective SNP-typing scheme for strain identification by high-resolution melting analysis.
Sangal V, Holt KE, Yuan J, Brown DJ, Filliol-Toutain I, Weill FX, Kim DW, da Silveira WD, Pickard D, Thomson NR, Parkhill J, Yu J. Sangal V, et al. Among authors: kim dw. J Clin Microbiol. 2013 Jan;51(1):303-5. doi: 10.1128/JCM.02238-12. Epub 2012 Oct 31. J Clin Microbiol. 2013. PMID: 23115259 Free PMC article.
Evidence for several waves of global transmission in the seventh cholera pandemic.
Mutreja A, Kim DW, Thomson NR, Connor TR, Lee JH, Kariuki S, Croucher NJ, Choi SY, Harris SR, Lebens M, Niyogi SK, Kim EJ, Ramamurthy T, Chun J, Wood JL, Clemens JD, Czerkinsky C, Nair GB, Holmgren J, Parkhill J, Dougan G. Mutreja A, et al. Among authors: kim dw, kim ej. Nature. 2011 Aug 24;477(7365):462-5. doi: 10.1038/nature10392. Nature. 2011. PMID: 21866102 Free PMC article.
Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae.
Chun J, Grim CJ, Hasan NA, Lee JH, Choi SY, Haley BJ, Taviani E, Jeon YS, Kim DW, Lee JH, Brettin TS, Bruce DC, Challacombe JF, Detter JC, Han CS, Munk AC, Chertkov O, Meincke L, Saunders E, Walters RA, Huq A, Nair GB, Colwell RR. Chun J, et al. Among authors: kim dw. Proc Natl Acad Sci U S A. 2009 Sep 8;106(36):15442-7. doi: 10.1073/pnas.0907787106. Epub 2009 Aug 31. Proc Natl Acad Sci U S A. 2009. PMID: 19720995 Free PMC article.
Replication of Vibrio cholerae classical CTX phage.
Kim EJ, Yu HJ, Lee JH, Kim JO, Han SH, Yun CH, Chun J, Nair GB, Kim DW. Kim EJ, et al. Among authors: kim dw, kim jo. Proc Natl Acad Sci U S A. 2017 Feb 28;114(9):2343-2348. doi: 10.1073/pnas.1701335114. Epub 2017 Feb 14. Proc Natl Acad Sci U S A. 2017. PMID: 28196886 Free PMC article.
5,174 results