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Advancing our understanding of the human microbiome using QIIME.
Navas-Molina JA, Peralta-Sánchez JM, González A, McMurdie PJ, Vázquez-Baeza Y, Xu Z, Ursell LK, Lauber C, Zhou H, Song SJ, Huntley J, Ackermann GL, Berg-Lyons D, Holmes S, Caporaso JG, Knight R. Navas-Molina JA, et al. Among authors: ursell lk. Methods Enzymol. 2013;531:371-444. doi: 10.1016/B978-0-12-407863-5.00019-8. Methods Enzymol. 2013. PMID: 24060131 Free PMC article.
Defining the human microbiome.
Ursell LK, Metcalf JL, Parfrey LW, Knight R. Ursell LK, et al. Nutr Rev. 2012 Aug;70 Suppl 1(Suppl 1):S38-44. doi: 10.1111/j.1753-4887.2012.00493.x. Nutr Rev. 2012. PMID: 22861806 Free PMC article. Review.
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences.
Rideout JR, He Y, Navas-Molina JA, Walters WA, Ursell LK, Gibbons SM, Chase J, McDonald D, Gonzalez A, Robbins-Pianka A, Clemente JC, Gilbert JA, Huse SM, Zhou HW, Knight R, Caporaso JG. Rideout JR, et al. Among authors: ursell lk. PeerJ. 2014 Aug 21;2:e545. doi: 10.7717/peerj.545. eCollection 2014. PeerJ. 2014. PMID: 25177538 Free PMC article.
Longitudinal analysis of microbial interaction between humans and the indoor environment.
Lax S, Smith DP, Hampton-Marcell J, Owens SM, Handley KM, Scott NM, Gibbons SM, Larsen P, Shogan BD, Weiss S, Metcalf JL, Ursell LK, Vázquez-Baeza Y, Van Treuren W, Hasan NA, Gibson MK, Colwell R, Dantas G, Knight R, Gilbert JA. Lax S, et al. Among authors: ursell lk. Science. 2014 Aug 29;345(6200):1048-52. doi: 10.1126/science.1254529. Science. 2014. PMID: 25170151 Free PMC article.
24 results