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Factors affecting relative fitness measurements in pairwise competition assays of human immunodeficiency viruses.
J Virol Methods. 2013 Dec;194(1-2):7-13. doi: 10.1016/j.jviromet.2013.07.062. Epub 2013 Aug 8.
J Virol Methods. 2013.
PMID: 23933395
Free PMC article.
HIV-1 conserved-element vaccines: relationship between sequence conservation and replicative capacity.
Rolland M, Manocheewa S, Swain JV, Lanxon-Cookson EC, Kim M, Westfall DH, Larsen BB, Gilbert PB, Mullins JI.
Rolland M, et al. Among authors: lanxon cookson ec.
J Virol. 2013 May;87(10):5461-7. doi: 10.1128/JVI.03033-12. Epub 2013 Mar 6.
J Virol. 2013.
PMID: 23468488
Free PMC article.
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Pairwise growth competition assay for determining the replication fitness of human immunodeficiency viruses.
Manocheewa S, Lanxon-Cookson EC, Liu Y, Swain JV, McClure J, Rao U, Maust B, Deng W, Sunshine JE, Kim M, Rolland M, Mullins JI.
Manocheewa S, et al. Among authors: lanxon cookson ec.
J Vis Exp. 2015 May 4;(99):e52610. doi: 10.3791/52610.
J Vis Exp. 2015.
PMID: 25993602
Free PMC article.
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A sensitive real-time PCR based assay to estimate the impact of amino acid substitutions on the competitive replication fitness of human immunodeficiency virus type 1 in cell culture.
Liu Y, Holte S, Rao U, McClure J, Konopa P, Swain JV, Lanxon-Cookson E, Kim M, Chen L, Mullins JI.
Liu Y, et al.
J Virol Methods. 2013 Apr;189(1):157-66. doi: 10.1016/j.jviromet.2012.10.016. Epub 2012 Nov 29.
J Virol Methods. 2013.
PMID: 23201292
Free PMC article.
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Fitness costs of mutations at the HIV-1 capsid hexamerization interface.
Manocheewa S, Swain JV, Lanxon-Cookson E, Rolland M, Mullins JI.
Manocheewa S, et al.
PLoS One. 2013 Jun 13;8(6):e66065. doi: 10.1371/journal.pone.0066065. Print 2013.
PLoS One. 2013.
PMID: 23785468
Free PMC article.
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Amino-acid co-variation in HIV-1 Gag subtype C: HLA-mediated selection pressure and compensatory dynamics.
Rolland M, Carlson JM, Manocheewa S, Swain JV, Lanxon-Cookson E, Deng W, Rousseau CM, Raugi DN, Learn GH, Maust BS, Coovadia H, Ndung'u T, Goulder PJ, Walker BD, Brander C, Heckerman DE, Mullins JI.
Rolland M, et al.
PLoS One. 2010 Sep 1;5(9):e12463. doi: 10.1371/journal.pone.0012463.
PLoS One. 2010.
PMID: 20824187
Free PMC article.
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Fitness-Balanced Escape Determines Resolution of Dynamic Founder Virus Escape Processes in HIV-1 Infection.
Sunshine JE, Larsen BB, Maust B, Casey E, Deng W, Chen L, Westfall DH, Kim M, Zhao H, Ghorai S, Lanxon-Cookson E, Rolland M, Collier AC, Maenza J, Mullins JI, Frahm N.
Sunshine JE, et al.
J Virol. 2015 Oct;89(20):10303-18. doi: 10.1128/JVI.01876-15. Epub 2015 Jul 29.
J Virol. 2015.
PMID: 26223634
Free PMC article.
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Systematic Assessment of Immune Marker Variation in Type 1 Diabetes: A Prospective Longitudinal Study.
Speake C, Bahnson HT, Wesley JD, Perdue N, Friedrich D, Pham MN, Lanxon-Cookson E, Kwok WW, Sehested Hansen B, von Herrath M, Greenbaum CJ.
Speake C, et al.
Front Immunol. 2019 Sep 13;10:2023. doi: 10.3389/fimmu.2019.02023. eCollection 2019.
Front Immunol. 2019.
PMID: 31572352
Free PMC article.
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