Nesvizhskii AI - Search Results

1

The functional interactome landscape of the human histone deacetylase family.

Joshi P, Greco TM, Guise AJ, Luo Y, Yu F, Nesvizhskii AI, Cristea IM. Joshi P, et al. Among authors: nesvizhskii ai. Mol Syst Biol. 2013;9:672. doi: 10.1038/msb.2013.26. Mol Syst Biol. 2013. PMID: 23752268 Free PMC article.

2

Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome.

Glatter T, Schittenhelm RB, Rinner O, Roguska K, Wepf A, Jünger MA, Köhler K, Jevtov I, Choi H, Schmidt A, Nesvizhskii AI, Stocker H, Hafen E, Aebersold R, Gstaiger M. Glatter T, et al. Among authors: nesvizhskii ai. Mol Syst Biol. 2011 Nov 8;7:547. doi: 10.1038/msb.2011.79. Mol Syst Biol. 2011. PMID: 22068330 Free PMC article.

3

The CRAPome: a contaminant repository for affinity purification-mass spectrometry data.

Mellacheruvu D, Wright Z, Couzens AL, Lambert JP, St-Denis NA, Li T, Miteva YV, Hauri S, Sardiu ME, Low TY, Halim VA, Bagshaw RD, Hubner NC, Al-Hakim A, Bouchard A, Faubert D, Fermin D, Dunham WH, Goudreault M, Lin ZY, Badillo BG, Pawson T, Durocher D, Coulombe B, Aebersold R, Superti-Furga G, Colinge J, Heck AJ, Choi H, Gstaiger M, Mohammed S, Cristea IM, Bennett KL, Washburn MP, Raught B, Ewing RM, Gingras AC, Nesvizhskii AI. Mellacheruvu D, et al. Among authors: nesvizhskii ai. Nat Methods. 2013 Aug;10(8):730-6. doi: 10.1038/nmeth.2557. Epub 2013 Jul 7. Nat Methods. 2013. PMID: 23921808 Free PMC article.

4

Label-free quantitative proteomics and SAINT analysis enable interactome mapping for the human Ser/Thr protein phosphatase 5.

Skarra DV, Goudreault M, Choi H, Mullin M, Nesvizhskii AI, Gingras AC, Honkanen RE. Skarra DV, et al. Among authors: nesvizhskii ai. Proteomics. 2011 Apr;11(8):1508-16. doi: 10.1002/pmic.201000770. Epub 2011 Feb 25. Proteomics. 2011. PMID: 21360678 Free PMC article.

5

Analysis of protein complexes through model-based biclustering of label-free quantitative AP-MS data.

Choi H, Kim S, Gingras AC, Nesvizhskii AI. Choi H, et al. Among authors: nesvizhskii ai. Mol Syst Biol. 2010 Jun 22;6:385. doi: 10.1038/msb.2010.41. Mol Syst Biol. 2010. PMID: 20571534 Free PMC article.

6

SAINTexpress: improvements and additional features in Significance Analysis of INTeractome software.

Teo G, Liu G, Zhang J, Nesvizhskii AI, Gingras AC, Choi H. Teo G, et al. Among authors: nesvizhskii ai. J Proteomics. 2014 Apr 4;100:37-43. doi: 10.1016/j.jprot.2013.10.023. Epub 2013 Oct 26. J Proteomics. 2014. PMID: 24513533 Free PMC article.

7

mapDIA: Preprocessing and statistical analysis of quantitative proteomics data from data independent acquisition mass spectrometry.

Teo G, Kim S, Tsou CC, Collins B, Gingras AC, Nesvizhskii AI, Choi H. Teo G, et al. Among authors: nesvizhskii ai. J Proteomics. 2015 Nov 3;129:108-120. doi: 10.1016/j.jprot.2015.09.013. Epub 2015 Sep 15. J Proteomics. 2015. PMID: 26381204 Free PMC article.

8

RBPJ/CBF1 interacts with L3MBTL3/MBT1 to promote repression of Notch signaling via histone demethylase KDM1A/LSD1.

Xu T, Park SS, Giaimo BD, Hall D, Ferrante F, Ho DM, Hori K, Anhezini L, Ertl I, Bartkuhn M, Zhang H, Milon E, Ha K, Conlon KP, Kuick R, Govindarajoo B, Zhang Y, Sun Y, Dou Y, Basrur V, Elenitoba-Johnson KS, Nesvizhskii AI, Ceron J, Lee CY, Borggrefe T, Kovall RA, Rual JF. Xu T, et al. Among authors: nesvizhskii ai. EMBO J. 2017 Nov 2;36(21):3232-3249. doi: 10.15252/embj.201796525. Epub 2017 Oct 13. EMBO J. 2017. PMID: 29030483 Free PMC article.

9

Tumor-Selective Altered Glycosylation and Functional Attenuation of CD73 in Human Hepatocellular Carcinoma.

Alcedo KP, Guerrero A, Basrur V, Fu D, Richardson ML, McLane JS, Tsou CC, Nesvizhskii AI, Welling TH, Lebrilla CB, Otey CA, Kim HJ, Omary MB, Snider NT. Alcedo KP, et al. Among authors: nesvizhskii ai. Hepatol Commun. 2019 Aug 9;3(10):1400-1414. doi: 10.1002/hep4.1410. eCollection 2019 Oct. Hepatol Commun. 2019. PMID: 31592495 Free PMC article.

10

Regulation of ALT-associated homology-directed repair by polyADP-ribosylation.

Hoang SM, Kaminski N, Bhargava R, Barroso-González J, Lynskey ML, García-Expósito L, Roncaioli JL, Wondisford AR, Wallace CT, Watkins SC, James DI, Waddell ID, Ogilvie D, Smith KM, da Veiga Leprevost F, Mellacharevu D, Nesvizhskii AI, Li J, Ray-Gallet D, Sobol RW, Almouzni G, O'Sullivan RJ. Hoang SM, et al. Among authors: nesvizhskii ai. Nat Struct Mol Biol. 2020 Dec;27(12):1152-1164. doi: 10.1038/s41594-020-0512-7. Epub 2020 Oct 12. Nat Struct Mol Biol. 2020. PMID: 33046907 Free PMC article.

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