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Mariner-based transposon mutagenesis for Bacteroides species.
Ichimura M, Uchida K, Nakayama-Imaohji H, Hirakawa H, Tada T, Morita H, Yasutomo K, Okazaki K, Kuwahara T. Ichimura M, et al. Among authors: hirakawa h. J Basic Microbiol. 2014 Jun;54(6):558-67. doi: 10.1002/jobm.201200763. Epub 2013 May 20. J Basic Microbiol. 2014. PMID: 23686946
PhoB regulates the survival of Bacteroides fragilis in peritoneal abscesses.
Wakimoto S, Nakayama-Imaohji H, Ichimura M, Morita H, Hirakawa H, Hayashi T, Yasutomo K, Kuwahara T. Wakimoto S, et al. Among authors: hirakawa h. PLoS One. 2013;8(1):e53829. doi: 10.1371/journal.pone.0053829. Epub 2013 Jan 15. PLoS One. 2013. PMID: 23342014 Free PMC article.
The lifestyle of the segmented filamentous bacterium: a non-culturable gut-associated immunostimulating microbe inferred by whole-genome sequencing.
Kuwahara T, Ogura Y, Oshima K, Kurokawa K, Ooka T, Hirakawa H, Itoh T, Nakayama-Imaohji H, Ichimura M, Itoh K, Ishifune C, Maekawa Y, Yasutomo K, Hattori M, Hayashi T. Kuwahara T, et al. Among authors: hirakawa h. DNA Res. 2011 Aug;18(4):291-303. doi: 10.1093/dnares/dsr022. Epub 2011 Jul 26. DNA Res. 2011. PMID: 21791478 Free PMC article.
Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis.
Naito M, Hirakawa H, Yamashita A, Ohara N, Shoji M, Yukitake H, Nakayama K, Toh H, Yoshimura F, Kuhara S, Hattori M, Hayashi T, Nakayama K. Naito M, et al. Among authors: hirakawa h. DNA Res. 2008 Aug;15(4):215-25. doi: 10.1093/dnares/dsn013. Epub 2008 Jun 3. DNA Res. 2008. PMID: 18524787 Free PMC article.
Whole-genome analyses reveal genetic instability of Acetobacter pasteurianus.
Azuma Y, Hosoyama A, Matsutani M, Furuya N, Horikawa H, Harada T, Hirakawa H, Kuhara S, Matsushita K, Fujita N, Shirai M. Azuma Y, et al. Among authors: hirakawa h. Nucleic Acids Res. 2009 Sep;37(17):5768-83. doi: 10.1093/nar/gkp612. Epub 2009 Jul 28. Nucleic Acids Res. 2009. PMID: 19638423 Free PMC article.
In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut.
Shirasawa K, Koilkonda P, Aoki K, Hirakawa H, Tabata S, Watanabe M, Hasegawa M, Kiyoshima H, Suzuki S, Kuwata C, Naito Y, Kuboyama T, Nakaya A, Sasamoto S, Watanabe A, Kato M, Kawashima K, Kishida Y, Kohara M, Kurabayashi A, Takahashi C, Tsuruoka H, Wada T, Isobe S. Shirasawa K, et al. Among authors: hirakawa h. BMC Plant Biol. 2012 Jun 6;12:80. doi: 10.1186/1471-2229-12-80. BMC Plant Biol. 2012. PMID: 22672714 Free PMC article.
764 results