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A multispecies polyadenylation site model.
Ho ES, Gunderson SI, Duffy S. Ho ES, et al. Among authors: duffy s. BMC Bioinformatics. 2013;14 Suppl 2(Suppl 2):S9. doi: 10.1186/1471-2105-14-S2-S9. Epub 2013 Jan 21. BMC Bioinformatics. 2013. PMID: 23368518 Free PMC article.
Four principles to establish a universal virus taxonomy.
Simmonds P, Adriaenssens EM, Zerbini FM, Abrescia NGA, Aiewsakun P, Alfenas-Zerbini P, Bao Y, Barylski J, Drosten C, Duffy S, Duprex WP, Dutilh BE, Elena SF, García ML, Junglen S, Katzourakis A, Koonin EV, Krupovic M, Kuhn JH, Lambert AJ, Lefkowitz EJ, Łobocka M, Lood C, Mahony J, Meier-Kolthoff JP, Mushegian AR, Oksanen HM, Poranen MM, Reyes-Muñoz A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Siddell S, Skern T, Smith DB, Sullivan MB, Suzuki N, Turner D, Van Doorslaer K, Vandamme AM, Varsani A, Vasilakis N. Simmonds P, et al. Among authors: duffy s. PLoS Biol. 2023 Feb 13;21(2):e3001922. doi: 10.1371/journal.pbio.3001922. eCollection 2023 Feb. PLoS Biol. 2023. PMID: 36780432 Free PMC article.
Evolution of the SARS-CoV-2 proteome in three dimensions (3D) during the first 6 months of the COVID-19 pandemic.
Lubin JH, Zardecki C, Dolan EM, Lu C, Shen Z, Dutta S, Westbrook JD, Hudson BP, Goodsell DS, Williams JK, Voigt M, Sarma V, Xie L, Venkatachalam T, Arnold S, Alfaro Alvarado LH, Catalfano K, Khan A, McCarthy E, Staggers S, Tinsley B, Trudeau A, Singh J, Whitmore L, Zheng H, Benedek M, Currier J, Dresel M, Duvvuru A, Dyszel B, Fingar E, Hennen EM, Kirsch M, Khan AA, Labrie-Cleary C, Laporte S, Lenkeit E, Martin K, Orellana M, Ortiz-Alvarez de la Campa M, Paredes I, Wheeler B, Rupert A, Sam A, See K, Soto Zapata S, Craig PA, Hall BL, Jiang J, Koeppe JR, Mills SA, Pikaart MJ, Roberts R, Bromberg Y, Hoyer JS, Duffy S, Tischfield J, Ruiz FX, Arnold E, Baum J, Sandberg J, Brannigan G, Khare SD, Burley SK. Lubin JH, et al. Among authors: duffy s. Proteins. 2022 May;90(5):1054-1080. doi: 10.1002/prot.26250. Epub 2021 Oct 9. Proteins. 2022. PMID: 34580920 Free PMC article.
1,854 results