Chu C - Search Results

1

Control of somatic tissue differentiation by the long non-coding RNA TINCR.

Kretz M, Siprashvili Z, Chu C, Webster DE, Zehnder A, Qu K, Lee CS, Flockhart RJ, Groff AF, Chow J, Johnston D, Kim GE, Spitale RC, Flynn RA, Zheng GX, Aiyer S, Raj A, Rinn JL, Chang HY, Khavari PA. Kretz M, et al. Among authors: chu c. Nature. 2013 Jan 10;493(7431):231-5. doi: 10.1038/nature11661. Epub 2012 Dec 2. Nature. 2013. PMID: 23201690 Free PMC article.

2

Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions.

Chu C, Qu K, Zhong FL, Artandi SE, Chang HY. Chu C, et al. Mol Cell. 2011 Nov 18;44(4):667-78. doi: 10.1016/j.molcel.2011.08.027. Epub 2011 Sep 29. Mol Cell. 2011. PMID: 21963238 Free PMC article.

3

Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification.

Quinn JJ, Ilik IA, Qu K, Georgiev P, Chu C, Akhtar A, Chang HY. Quinn JJ, et al. Among authors: chu c. Nat Biotechnol. 2014 Sep;32(9):933-940. doi: 10.1038/nbt.2943. Epub 2014 Jul 6. Nat Biotechnol. 2014. PMID: 24997788 Free PMC article.

4

Technologies to probe functions and mechanisms of long noncoding RNAs.

Chu C, Spitale RC, Chang HY. Chu C, et al. Nat Struct Mol Biol. 2015 Jan;22(1):29-35. doi: 10.1038/nsmb.2921. Nat Struct Mol Biol. 2015. PMID: 25565030

5

Chromatin isolation by RNA purification (ChIRP).

Chu C, Quinn J, Chang HY. Chu C, et al. J Vis Exp. 2012 Mar 25;(61):3912. doi: 10.3791/3912. J Vis Exp. 2012. PMID: 22472705 Free PMC article.

6

Systematic discovery of Xist RNA binding proteins.

Chu C, Zhang QC, da Rocha ST, Flynn RA, Bharadwaj M, Calabrese JM, Magnuson T, Heard E, Chang HY. Chu C, et al. Cell. 2015 Apr 9;161(2):404-16. doi: 10.1016/j.cell.2015.03.025. Epub 2015 Apr 2. Cell. 2015. PMID: 25843628 Free PMC article.

7

7SK-BAF axis controls pervasive transcription at enhancers.

Flynn RA, Do BT, Rubin AJ, Calo E, Lee B, Kuchelmeister H, Rale M, Chu C, Kool ET, Wysocka J, Khavari PA, Chang HY. Flynn RA, et al. Among authors: chu c. Nat Struct Mol Biol. 2016 Mar;23(3):231-8. doi: 10.1038/nsmb.3176. Epub 2016 Feb 15. Nat Struct Mol Biol. 2016. PMID: 26878240 Free PMC article.

8

Understanding RNA-Chromatin Interactions Using Chromatin Isolation by RNA Purification (ChIRP).

Chu C, Chang HY. Chu C, et al. Methods Mol Biol. 2016;1480:115-23. doi: 10.1007/978-1-4939-6380-5_10. Methods Mol Biol. 2016. PMID: 27659979

9

ChIRP-MS: RNA-Directed Proteomic Discovery.

Chu C, Chang HY. Chu C, et al. Methods Mol Biol. 2018;1861:37-45. doi: 10.1007/978-1-4939-8766-5_3. Methods Mol Biol. 2018. PMID: 30218357

10

PIRCh-seq: functional classification of non-coding RNAs associated with distinct histone modifications.

Fang J, Ma Q, Chu C, Huang B, Li L, Cai P, Batista PJ, Tolentino KEM, Xu J, Li R, Du P, Qu K, Chang HY. Fang J, et al. Among authors: chu c. Genome Biol. 2019 Dec 20;20(1):292. doi: 10.1186/s13059-019-1880-3. Genome Biol. 2019. PMID: 31862000 Free PMC article.

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