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jModelTest 2: more models, new heuristics and parallel computing.
Nat Methods. 2012 Jul 30;9(8):772. doi: 10.1038/nmeth.2109.
Nat Methods. 2012.
PMID: 22847109
Free PMC article.
No abstract available.
ProtTest 3: fast selection of best-fit models of protein evolution.
Darriba D, Taboada GL, Doallo R, Posada D.
Darriba D, et al. Among authors: doallo r.
Bioinformatics. 2011 Apr 15;27(8):1164-5. doi: 10.1093/bioinformatics/btr088. Epub 2011 Feb 17.
Bioinformatics. 2011.
PMID: 21335321
Free PMC article.
Item in Clipboard
Parameter estimation in large-scale systems biology models: a parallel and self-adaptive cooperative strategy.
Penas DR, González P, Egea JA, Doallo R, Banga JR.
Penas DR, et al. Among authors: doallo r.
BMC Bioinformatics. 2017 Jan 21;18(1):52. doi: 10.1186/s12859-016-1452-4.
BMC Bioinformatics. 2017.
PMID: 28109249
Free PMC article.
Item in Clipboard
A parallel metaheuristic for large mixed-integer dynamic optimization problems, with applications in computational biology.
Penas DR, Henriques D, González P, Doallo R, Saez-Rodriguez J, Banga JR.
Penas DR, et al. Among authors: doallo r.
PLoS One. 2017 Aug 15;12(8):e0182186. doi: 10.1371/journal.pone.0182186. eCollection 2017.
PLoS One. 2017.
PMID: 28813442
Free PMC article.
Item in Clipboard
Analysis of interval-grouped data in weed science: The binnednp Rcpp package.
Barreiro-Ures D, Francisco-Fernández M, Cao R, Fraguela BB, Doallo R, González-Andújar JL, Reyes M.
Barreiro-Ures D, et al. Among authors: doallo r.
Ecol Evol. 2019 Sep 13;9(19):10903-10915. doi: 10.1002/ece3.5448. eCollection 2019 Oct.
Ecol Evol. 2019.
PMID: 31641444
Free PMC article.
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