Calarco JA - Search Results

1

Tissue-specific alternative splicing remodels protein-protein interaction networks.

Ellis JD, Barrios-Rodiles M, Colak R, Irimia M, Kim T, Calarco JA, Wang X, Pan Q, O'Hanlon D, Kim PM, Wrana JL, Blencowe BJ. Ellis JD, et al. Among authors: calarco ja. Mol Cell. 2012 Jun 29;46(6):884-92. doi: 10.1016/j.molcel.2012.05.037. Mol Cell. 2012. PMID: 22749401 Free article.

2

Technologies for the global discovery and analysis of alternative splicing.

Calarco JA, Saltzman AL, Ip JY, Blencowe BJ. Calarco JA, et al. Adv Exp Med Biol. 2007;623:64-84. doi: 10.1007/978-0-387-77374-2_5. Adv Exp Med Biol. 2007. PMID: 18380341 Review.

3

Regulation of vertebrate nervous system alternative splicing and development by an SR-related protein.

Calarco JA, Superina S, O'Hanlon D, Gabut M, Raj B, Pan Q, Skalska U, Clarke L, Gelinas D, van der Kooy D, Zhen M, Ciruna B, Blencowe BJ. Calarco JA, et al. Cell. 2009 Sep 4;138(5):898-910. doi: 10.1016/j.cell.2009.06.012. Cell. 2009. PMID: 19737518 Free article.

4

Genome-wide CRISPR-Cas9 Interrogation of Splicing Networks Reveals a Mechanism for Recognition of Autism-Misregulated Neuronal Microexons.

Gonatopoulos-Pournatzis T, Wu M, Braunschweig U, Roth J, Han H, Best AJ, Raj B, Aregger M, O'Hanlon D, Ellis JD, Calarco JA, Moffat J, Gingras AC, Blencowe BJ. Gonatopoulos-Pournatzis T, et al. Among authors: calarco ja. Mol Cell. 2018 Nov 1;72(3):510-524.e12. doi: 10.1016/j.molcel.2018.10.008. Mol Cell. 2018. PMID: 30388412 Free article.

5

Global analysis of alternative splicing differences between humans and chimpanzees.

Calarco JA, Xing Y, Cáceres M, Calarco JP, Xiao X, Pan Q, Lee C, Preuss TM, Blencowe BJ. Calarco JA, et al. Among authors: calarco jp. Genes Dev. 2007 Nov 15;21(22):2963-75. doi: 10.1101/gad.1606907. Epub 2007 Oct 31. Genes Dev. 2007. PMID: 17978102 Free PMC article.

6

A systematic characterization of Cwc21, the yeast ortholog of the human spliceosomal protein SRm300.

Khanna M, Van Bakel H, Tang X, Calarco JA, Babak T, Guo G, Emili A, Greenblatt JF, Hughes TR, Krogan NJ, Blencowe BJ. Khanna M, et al. Among authors: calarco ja. RNA. 2009 Dec;15(12):2174-85. doi: 10.1261/rna.1790509. Epub 2009 Sep 29. RNA. 2009. PMID: 19789211 Free PMC article.

7

Deciphering the splicing code.

Barash Y, Calarco JA, Gao W, Pan Q, Wang X, Shai O, Blencowe BJ, Frey BJ. Barash Y, et al. Among authors: calarco ja. Nature. 2010 May 6;465(7294):53-9. doi: 10.1038/nature09000. Nature. 2010. PMID: 20445623

8

Genome-wide analysis of alternative splicing in Caenorhabditis elegans.

Ramani AK, Calarco JA, Pan Q, Mavandadi S, Wang Y, Nelson AC, Lee LJ, Morris Q, Blencowe BJ, Zhen M, Fraser AG. Ramani AK, et al. Among authors: calarco ja. Genome Res. 2011 Feb;21(2):342-8. doi: 10.1101/gr.114645.110. Epub 2010 Dec 22. Genome Res. 2011. PMID: 21177968 Free PMC article.

9

Networking in a global world: establishing functional connections between neural splicing regulators and their target transcripts.

Calarco JA, Zhen M, Blencowe BJ. Calarco JA, et al. RNA. 2011 May;17(5):775-91. doi: 10.1261/rna.2603911. Epub 2011 Mar 17. RNA. 2011. PMID: 21415141 Free PMC article. Review.

10

Role for PSF in mediating transcriptional activator-dependent stimulation of pre-mRNA processing in vivo.

Rosonina E, Ip JY, Calarco JA, Bakowski MA, Emili A, McCracken S, Tucker P, Ingles CJ, Blencowe BJ. Rosonina E, et al. Among authors: calarco ja. Mol Cell Biol. 2005 Aug;25(15):6734-46. doi: 10.1128/MCB.25.15.6734-6746.2005. Mol Cell Biol. 2005. PMID: 16024807 Free PMC article.

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