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Systems immunology of human malaria.
Tran TM, Samal B, Kirkness E, Crompton PD. Tran TM, et al. Among authors: kirkness e. Trends Parasitol. 2012 Jun;28(6):248-57. doi: 10.1016/j.pt.2012.03.006. Epub 2012 May 15. Trends Parasitol. 2012. PMID: 22592005 Free PMC article. Review.
Transcriptomic evidence for modulation of host inflammatory responses during febrile Plasmodium falciparum malaria.
Tran TM, Jones MB, Ongoiba A, Bijker EM, Schats R, Venepally P, Skinner J, Doumbo S, Quinten E, Visser LG, Whalen E, Presnell S, O'Connell EM, Kayentao K, Doumbo OK, Chaussabel D, Lorenzi H, Nutman TB, Ottenhoff TH, Haks MC, Traore B, Kirkness EF, Sauerwein RW, Crompton PD. Tran TM, et al. Among authors: kirkness ef. Sci Rep. 2016 Aug 10;6:31291. doi: 10.1038/srep31291. Sci Rep. 2016. PMID: 27506615 Free PMC article.
A Molecular Signature in Blood Reveals a Role for p53 in Regulating Malaria-Induced Inflammation.
Tran TM, Guha R, Portugal S, Skinner J, Ongoiba A, Bhardwaj J, Jones M, Moebius J, Venepally P, Doumbo S, DeRiso EA, Li S, Vijayan K, Anzick SL, Hart GT, O'Connell EM, Doumbo OK, Kaushansky A, Alter G, Felgner PL, Lorenzi H, Kayentao K, Traore B, Kirkness EF, Crompton PD. Tran TM, et al. Among authors: kirkness ef. Immunity. 2019 Oct 15;51(4):750-765.e10. doi: 10.1016/j.immuni.2019.08.009. Epub 2019 Sep 3. Immunity. 2019. PMID: 31492649 Free PMC article.
The blood DNA virome in 8,000 humans.
Moustafa A, Xie C, Kirkness E, Biggs W, Wong E, Turpaz Y, Bloom K, Delwart E, Nelson KE, Venter JC, Telenti A. Moustafa A, et al. Among authors: kirkness e. PLoS Pathog. 2017 Mar 22;13(3):e1006292. doi: 10.1371/journal.ppat.1006292. eCollection 2017 Mar. PLoS Pathog. 2017. PMID: 28328962 Free PMC article.
An unsupervised learning approach to identify novel signatures of health and disease from multimodal data.
Shomorony I, Cirulli ET, Huang L, Napier LA, Heister RR, Hicks M, Cohen IV, Yu HC, Swisher CL, Schenker-Ahmed NM, Li W, Nelson KE, Brar P, Kahn AM, Spector TD, Caskey CT, Venter JC, Karow DS, Kirkness EF, Shah N. Shomorony I, et al. Among authors: kirkness ef. Genome Med. 2020 Jan 10;12(1):7. doi: 10.1186/s13073-019-0705-z. Genome Med. 2020. PMID: 31924279 Free PMC article.
Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle.
Kirkness EF, Haas BJ, Sun W, Braig HR, Perotti MA, Clark JM, Lee SH, Robertson HM, Kennedy RC, Elhaik E, Gerlach D, Kriventseva EV, Elsik CG, Graur D, Hill CA, Veenstra JA, Walenz B, Tubío JM, Ribeiro JM, Rozas J, Johnston JS, Reese JT, Popadic A, Tojo M, Raoult D, Reed DL, Tomoyasu Y, Kraus E, Mittapalli O, Margam VM, Li HM, Meyer JM, Johnson RM, Romero-Severson J, Vanzee JP, Alvarez-Ponce D, Vieira FG, Aguadé M, Guirao-Rico S, Anzola JM, Yoon KS, Strycharz JP, Unger MF, Christley S, Lobo NF, Seufferheld MJ, Wang N, Dasch GA, Struchiner CJ, Madey G, Hannick LI, Bidwell S, Joardar V, Caler E, Shao R, Barker SC, Cameron S, Bruggner RV, Regier A, Johnson J, Viswanathan L, Utterback TR, Sutton GG, Lawson D, Waterhouse RM, Venter JC, Strausberg RL, Berenbaum MR, Collins FH, Zdobnov EM, Pittendrigh BR. Kirkness EF, et al. Proc Natl Acad Sci U S A. 2010 Jul 6;107(27):12168-73. doi: 10.1073/pnas.1003379107. Epub 2010 Jun 21. Proc Natl Acad Sci U S A. 2010. PMID: 20566863 Free PMC article.
128 results