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Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes.
St John JA, Braun EL, Isberg SR, Miles LG, Chong AY, Gongora J, Dalzell P, Moran C, Bed'hom B, Abzhanov A, Burgess SC, Cooksey AM, Castoe TA, Crawford NG, Densmore LD, Drew JC, Edwards SV, Faircloth BC, Fujita MK, Greenwold MJ, Hoffmann FG, Howard JM, Iguchi T, Janes DE, Khan SY, Kohno S, de Koning AJ, Lance SL, McCarthy FM, McCormack JE, Merchant ME, Peterson DG, Pollock DD, Pourmand N, Raney BJ, Roessler KA, Sanford JR, Sawyer RH, Schmidt CJ, Triplett EW, Tuberville TD, Venegas-Anaya M, Howard JT, Jarvis ED, Guillette LJ Jr, Glenn TC, Green RE, Ray DA. St John JA, et al. Among authors: sanford jr. Genome Biol. 2012 Jan 31;13(1):415. doi: 10.1186/gb-2012-13-1-415. Genome Biol. 2012. PMID: 22293439 Free PMC article.
Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling.
Rice ES, Kohno S, John JS, Pham S, Howard J, Lareau LF, O'Connell BL, Hickey G, Armstrong J, Deran A, Fiddes I, Platt RN 2nd, Gresham C, McCarthy F, Kern C, Haan D, Phan T, Schmidt C, Sanford JR, Ray DA, Paten B, Guillette LJ Jr, Green RE. Rice ES, et al. Among authors: sanford jr. Genome Res. 2017 May;27(5):686-696. doi: 10.1101/gr.213595.116. Epub 2017 Jan 30. Genome Res. 2017. PMID: 28137821 Free PMC article.
Frac-seq reveals isoform-specific recruitment to polyribosomes.
Sterne-Weiler T, Martinez-Nunez RT, Howard JM, Cvitovik I, Katzman S, Tariq MA, Pourmand N, Sanford JR. Sterne-Weiler T, et al. Among authors: sanford jr. Genome Res. 2013 Oct;23(10):1615-23. doi: 10.1101/gr.148585.112. Epub 2013 Jun 19. Genome Res. 2013. PMID: 23783272 Free PMC article.
HNRNPA1 promotes recognition of splice site decoys by U2AF2 in vivo.
Howard JM, Lin H, Wallace AJ, Kim G, Draper JM, Haeussler M, Katzman S, Toloue M, Liu Y, Sanford JR. Howard JM, et al. Among authors: sanford jr. Genome Res. 2018 May;28(5):689-698. doi: 10.1101/gr.229062.117. Epub 2018 Apr 12. Genome Res. 2018. PMID: 29650551 Free PMC article.
83 results