Herrington D - Search Results

1

An overview of population genetic data simulation.

Yuan X, Miller DJ, Zhang J, Herrington D, Wang Y. Yuan X, et al. Among authors: herrington d. J Comput Biol. 2012 Jan;19(1):42-54. doi: 10.1089/cmb.2010.0188. Epub 2011 Dec 9. J Comput Biol. 2012. PMID: 22149682 Free PMC article. Review.

2

Comparative analysis of methods for detecting interacting loci.

Chen L, Yu G, Langefeld CD, Miller DJ, Guy RT, Raghuram J, Yuan X, Herrington DM, Wang Y. Chen L, et al. Among authors: herrington dm. BMC Genomics. 2011 Jul 5;12:344. doi: 10.1186/1471-2164-12-344. BMC Genomics. 2011. PMID: 21729295 Free PMC article.

3

A Ground Truth Based Comparative Study on Detecting Epistatic SNPs.

Chen L, Yu G, Miller DJ, Song L, Langefeld C, Herrington D, Liu Y, Wang Y. Chen L, et al. Among authors: herrington d. Proceedings (IEEE Int Conf Bioinformatics Biomed). 2009 Nov 1;1-4(Nov 2009):26-31. doi: 10.1109/BIBMW.2009.5332132. Proceedings (IEEE Int Conf Bioinformatics Biomed). 2009. PMID: 21151836 Free PMC article.

4

Asymmetric independence modeling identifies novel gene-environment interactions.

Yu G, Miller DJ, Wu CT, Hoffman EP, Liu C, Herrington DM, Wang Y. Yu G, et al. Sci Rep. 2019 Feb 21;9(1):2455. doi: 10.1038/s41598-019-38983-z. Sci Rep. 2019. PMID: 30792419 Free PMC article.

5

An algorithm for learning maximum entropy probability models of disease risk that efficiently searches and sparingly encodes multilocus genomic interactions.

Miller DJ, Zhang Y, Yu G, Liu Y, Chen L, Langefeld CD, Herrington D, Wang Y. Miller DJ, et al. Among authors: herrington d. Bioinformatics. 2009 Oct 1;25(19):2478-85. doi: 10.1093/bioinformatics/btp435. Epub 2009 Jul 16. Bioinformatics. 2009. PMID: 19608708 Free PMC article.

6

debCAM: a bioconductor R package for fully unsupervised deconvolution of complex tissues.

Chen L, Wu CT, Wang N, Herrington DM, Clarke R, Wang Y. Chen L, et al. Bioinformatics. 2020 Jun 1;36(12):3927-3929. doi: 10.1093/bioinformatics/btaa205. Bioinformatics. 2020. PMID: 32219387 Free PMC article.

7

KDDN: an open-source Cytoscape app for constructing differential dependency networks with significant rewiring.

Tian Y, Zhang B, Hoffman EP, Clarke R, Zhang Z, Shih IeM, Xuan J, Herrington DM, Wang Y. Tian Y, et al. Bioinformatics. 2015 Jan 15;31(2):287-9. doi: 10.1093/bioinformatics/btu632. Epub 2014 Sep 30. Bioinformatics. 2015. PMID: 25273109 Free PMC article.

8

Whole Exome Sequencing to Identify Genetic Variants Associated with Raised Atherosclerotic Lesions in Young Persons.

Hixson JE, Jun G, Shimmin LC, Wang Y, Yu G, Mao C, Warren AS, Howard TD, Heide RSV, Van Eyk J, Wang Y, Herrington DM. Hixson JE, et al. Among authors: herrington dm. Sci Rep. 2017 Jun 22;7(1):4091. doi: 10.1038/s41598-017-04433-x. Sci Rep. 2017. PMID: 28642624 Free PMC article.

9

Targeted realignment of LC-MS profiles by neighbor-wise compound-specific graphical time warping with misalignment detection.

Wu CT, Wang Y, Wang Y, Ebbels T, Karaman I, Graça G, Pinto R, Herrington DM, Wang Y, Yu G. Wu CT, et al. Bioinformatics. 2020 May 1;36(9):2862-2871. doi: 10.1093/bioinformatics/btaa037. Bioinformatics. 2020. PMID: 31950989 Free PMC article.

10

Data-driven detection of subtype-specific differentially expressed genes.

Chen L, Lu Y, Wu CT, Clarke R, Yu G, Van Eyk JE, Herrington DM, Wang Y. Chen L, et al. Sci Rep. 2021 Jan 11;11(1):332. doi: 10.1038/s41598-020-79704-1. Sci Rep. 2021. PMID: 33432005 Free PMC article.

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