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The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools.
Lamesch P, Berardini TZ, Li D, Swarbreck D, Wilks C, Sasidharan R, Muller R, Dreher K, Alexander DL, Garcia-Hernandez M, Karthikeyan AS, Lee CH, Nelson WD, Ploetz L, Singh S, Wensel A, Huala E. Lamesch P, et al. Among authors: swarbreck d. Nucleic Acids Res. 2012 Jan;40(Database issue):D1202-10. doi: 10.1093/nar/gkr1090. Epub 2011 Dec 2. Nucleic Acids Res. 2012. PMID: 22140109 Free PMC article.
The Arabidopsis Information Resource (TAIR): gene structure and function annotation.
Swarbreck D, Wilks C, Lamesch P, Berardini TZ, Garcia-Hernandez M, Foerster H, Li D, Meyer T, Muller R, Ploetz L, Radenbaugh A, Singh S, Swing V, Tissier C, Zhang P, Huala E. Swarbreck D, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D1009-14. doi: 10.1093/nar/gkm965. Epub 2007 Nov 5. Nucleic Acids Res. 2008. PMID: 17986450 Free PMC article.
GFam: a platform for automatic annotation of gene families.
Sasidharan R, Nepusz T, Swarbreck D, Huala E, Paccanaro A. Sasidharan R, et al. Among authors: swarbreck d. Nucleic Acids Res. 2012 Oct;40(19):e152. doi: 10.1093/nar/gks631. Epub 2012 Jul 11. Nucleic Acids Res. 2012. PMID: 22790981 Free PMC article.
An Improved microRNA Annotation of the Canine Genome.
Penso-Dolfin L, Swofford R, Johnson J, Alföldi J, Lindblad-Toh K, Swarbreck D, Moxon S, Di Palma F. Penso-Dolfin L, et al. Among authors: swarbreck d. PLoS One. 2016 Apr 27;11(4):e0153453. doi: 10.1371/journal.pone.0153453. eCollection 2016. PLoS One. 2016. PMID: 27119849 Free PMC article.
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations.
Clavijo BJ, Venturini L, Schudoma C, Accinelli GG, Kaithakottil G, Wright J, Borrill P, Kettleborough G, Heavens D, Chapman H, Lipscombe J, Barker T, Lu FH, McKenzie N, Raats D, Ramirez-Gonzalez RH, Coince A, Peel N, Percival-Alwyn L, Duncan O, Trösch J, Yu G, Bolser DM, Namaati G, Kerhornou A, Spannagl M, Gundlach H, Haberer G, Davey RP, Fosker C, Palma FD, Phillips AL, Millar AH, Kersey PJ, Uauy C, Krasileva KV, Swarbreck D, Bevan MW, Clark MD. Clavijo BJ, et al. Among authors: swarbreck d. Genome Res. 2017 May;27(5):885-896. doi: 10.1101/gr.217117.116. Genome Res. 2017. PMID: 28420692 Free PMC article.
Lessons from Fraxinus, a crowd-sourced citizen science game in genomics.
Rallapalli G; Fraxinus Players; Saunders DG, Yoshida K, Edwards A, Lugo CA, Collin S, Clavijo B, Corpas M, Swarbreck D, Clark M, Downie JA, Kamoun S; Team Cooper; MacLean D. Rallapalli G, et al. Among authors: swarbreck d. Elife. 2015 Jul 29;4:e07460. doi: 10.7554/eLife.07460. Elife. 2015. PMID: 26219214 Free PMC article.
64 results