Arai S - Search Results

1

Sarkosyl is a good regeneration reagent for studies on vacuolar-type ATPase subunit interactions in Biacore experiments.

Rahman S, Arai S, Saijo S, Yamato I, Murata T. Rahman S, et al. Among authors: arai s. Anal Biochem. 2011 Nov 15;418(2):301-3. doi: 10.1016/j.ab.2011.07.009. Epub 2011 Jul 18. Anal Biochem. 2011. PMID: 21806959

2

Reconstitution in vitro of the catalytic portion (NtpA3-B3-D-G complex) of Enterococcus hirae V-type Na+-ATPase.

Arai S, Yamato I, Shiokawa A, Saijo S, Kakinuma Y, Ishizuka-Katsura Y, Toyama M, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T. Arai S, et al. Biochem Biophys Res Commun. 2009 Dec 18;390(3):698-702. doi: 10.1016/j.bbrc.2009.10.032. Epub 2009 Oct 13. Biochem Biophys Res Commun. 2009. PMID: 19833097

3

Expression, purification and characterization of isoforms of peripheral stalk subunits of human V-ATPase.

Rahman S, Ishizuka-Katsura Y, Arai S, Saijo S, Yamato I, Toyama M, Ohsawa N, Inoue M, Honda K, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T. Rahman S, et al. Among authors: arai s. Protein Expr Purif. 2011 Aug;78(2):181-8. doi: 10.1016/j.pep.2011.02.012. Epub 2011 Feb 26. Protein Expr Purif. 2011. PMID: 21356312

4

Crystal structure of the central axis DF complex of the prokaryotic V-ATPase.

Saijo S, Arai S, Hossain KM, Yamato I, Suzuki K, Kakinuma Y, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T. Saijo S, et al. Among authors: arai s. Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):19955-60. doi: 10.1073/pnas.1108810108. Epub 2011 Nov 23. Proc Natl Acad Sci U S A. 2011. PMID: 22114184 Free PMC article.

5

Calculating the Na⁺ translocating V-ATPase catalytic site affinity for substrate binding by homology modeled NtpA monomer using molecular dynamics/free energy calculation.

Muhammed Z, Arai S, Saijo S, Yamato I, Murata T, Suenaga A. Muhammed Z, et al. Among authors: arai s. J Mol Graph Model. 2012 Jul;37:59-66. doi: 10.1016/j.jmgm.2012.03.006. Epub 2012 Mar 30. J Mol Graph Model. 2012. PMID: 22622011

6

Rotation mechanism of Enterococcus hirae V1-ATPase based on asymmetric crystal structures.

Arai S, Saijo S, Suzuki K, Mizutani K, Kakinuma Y, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Yamato I, Murata T. Arai S, et al. Nature. 2013 Jan 31;493(7434):703-7. doi: 10.1038/nature11778. Epub 2013 Jan 13. Nature. 2013. PMID: 23334411

7

Loose binding of the DF axis with the A3B3 complex stimulates the initial activity of Enterococcus hirae V1-ATPase.

Alam MJ, Arai S, Saijo S, Suzuki K, Mizutani K, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Kakinuma Y, Yamato I, Murata T. Alam MJ, et al. Among authors: arai s. PLoS One. 2013 Sep 13;8(9):e74291. doi: 10.1371/journal.pone.0074291. eCollection 2013. PLoS One. 2013. PMID: 24058539 Free PMC article.

8

An affinity change model to elucidate the rotation mechanism of V₁-ATPase.

Arai S, Maruyama S, Shiroishi M, Yamato I, Murata T. Arai S, et al. Biochem Biophys Res Commun. 2020 Dec 17;533(4):1413-1418. doi: 10.1016/j.bbrc.2020.10.033. Epub 2020 Oct 21. Biochem Biophys Res Commun. 2020. PMID: 33097182

9

Mutant LV(476-7)AA of A-subunit of Enterococcus hirae V1-ATPase: High affinity of A3B3 complex to DF axis and low ATPase activity.

Alam J, Yamato I, Arai S, Saijo S, Mizutani K, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Kakinuma Y, Murata T. Alam J, et al. Among authors: arai s. Springerplus. 2013 Dec 27;2:689. doi: 10.1186/2193-1801-2-689. eCollection 2013. Springerplus. 2013. PMID: 24404436 Free PMC article.

10

Syntheses and applications of fluorescent and biotinylated epolactaene derivatives: Epolactaene and its derivative induce disulfide formation.

Kuramochi K, Yukizawa S, Ikeda S, Sunoki T, Arai S, Matsui R, Morita A, Mizushina Y, Sakaguchi K, Sugawara F, Ikekita M, Kobayashi S. Kuramochi K, et al. Among authors: arai s. Bioorg Med Chem. 2008 May 1;16(9):5039-49. doi: 10.1016/j.bmc.2008.03.029. Epub 2008 Mar 14. Bioorg Med Chem. 2008. PMID: 18375133

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