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Minimal absent words in prokaryotic and eukaryotic genomes.
Garcia SP, Pinho AJ, Rodrigues JM, Bastos CA, Ferreira PJ. Garcia SP, et al. Among authors: ferreira pj. PLoS One. 2011 Jan 31;6(1):e16065. doi: 10.1371/journal.pone.0016065. PLoS One. 2011. PMID: 21386877 Free PMC article.
A three-state model for DNA protein-coding regions.
Pinho AJ, Neves AJ, Afreixo V, Bastos CA, Ferreira PJ. Pinho AJ, et al. Among authors: ferreira pj. IEEE Trans Biomed Eng. 2006 Nov;53(11):2148-55. doi: 10.1109/TBME.2006.879477. IEEE Trans Biomed Eng. 2006. PMID: 17073319
On finding minimal absent words.
Pinho AJ, Ferreira PJ, Garcia SP, Rodrigues JM. Pinho AJ, et al. Among authors: ferreira pj. BMC Bioinformatics. 2009 May 8;10:137. doi: 10.1186/1471-2105-10-137. BMC Bioinformatics. 2009. PMID: 19426495 Free PMC article.
Genome analysis with inter-nucleotide distances.
Afreixo V, Bastos CA, Pinho AJ, Garcia SP, Ferreira PJ. Afreixo V, et al. Among authors: ferreira pj. Bioinformatics. 2009 Dec 1;25(23):3064-70. doi: 10.1093/bioinformatics/btp546. Epub 2009 Sep 16. Bioinformatics. 2009. PMID: 19759198 Free PMC article.
The breakdown of the word symmetry in the human genome.
Afreixo V, Bastos CA, Garcia SP, Rodrigues JM, Pinho AJ, Ferreira PJ. Afreixo V, et al. Among authors: ferreira pj. J Theor Biol. 2013 Oct 21;335:153-9. doi: 10.1016/j.jtbi.2013.06.032. Epub 2013 Jul 2. J Theor Biol. 2013. PMID: 23831271
87 results