Sengupta D - Search Results

1

Structural basis for the enhanced activity of cyclic antimicrobial peptides: the case of BPC194.

Mika JT, Moiset G, Cirac AD, Feliu L, Bardají E, Planas M, Sengupta D, Marrink SJ, Poolman B. Mika JT, et al. Among authors: sengupta d. Biochim Biophys Acta. 2011 Sep;1808(9):2197-205. doi: 10.1016/j.bbamem.2011.05.001. Epub 2011 May 8. Biochim Biophys Acta. 2011. PMID: 21586269 Free article.

2

Structure of spheroidal HDL particles revealed by combined atomistic and coarse-grained simulations.

Catte A, Patterson JC, Bashtovyy D, Jones MK, Gu F, Li L, Rampioni A, Sengupta D, Vuorela T, Niemelä P, Karttunen M, Marrink SJ, Vattulainen I, Segrest JP. Catte A, et al. Among authors: sengupta d. Biophys J. 2008 Mar 15;94(6):2306-19. doi: 10.1529/biophysj.107.115857. Epub 2007 Dec 7. Biophys J. 2008. PMID: 18065479 Free PMC article.

3

Toroidal pores formed by antimicrobial peptides show significant disorder.

Sengupta D, Leontiadou H, Mark AE, Marrink SJ. Sengupta D, et al. Biochim Biophys Acta. 2008 Oct;1778(10):2308-17. doi: 10.1016/j.bbamem.2008.06.007. Epub 2008 Jun 18. Biochim Biophys Acta. 2008. PMID: 18602889 Free article.

4

The structural basis for peptide selection by the transport receptor OppA.

Berntsson RP, Doeven MK, Fusetti F, Duurkens RH, Sengupta D, Marrink SJ, Thunnissen AM, Poolman B, Slotboom DJ. Berntsson RP, et al. Among authors: sengupta d. EMBO J. 2009 May 6;28(9):1332-40. doi: 10.1038/emboj.2009.65. Epub 2009 Mar 19. EMBO J. 2009. PMID: 19300437 Free PMC article.

5

Membrane poration by antimicrobial peptides combining atomistic and coarse-grained descriptions.

Rzepiela AJ, Sengupta D, Goga N, Marrink SJ. Rzepiela AJ, et al. Among authors: sengupta d. Faraday Discuss. 2010;144:431-43; discussion 445-81. doi: 10.1039/b901615e. Faraday Discuss. 2010. PMID: 20158042

6

Polarizable water model for the coarse-grained MARTINI force field.

Yesylevskyy SO, Schäfer LV, Sengupta D, Marrink SJ. Yesylevskyy SO, et al. Among authors: sengupta d. PLoS Comput Biol. 2010 Jun 10;6(6):e1000810. doi: 10.1371/journal.pcbi.1000810. PLoS Comput Biol. 2010. PMID: 20548957 Free PMC article.

7

Lipid-mediated interactions tune the association of glycophorin A helix and its disruptive mutants in membranes.

Sengupta D, Marrink SJ. Sengupta D, et al. Phys Chem Chem Phys. 2010 Oct 28;12(40):12987-96. doi: 10.1039/c0cp00101e. Epub 2010 Aug 23. Phys Chem Chem Phys. 2010. PMID: 20733990

8

The molecular basis for antimicrobial activity of pore-forming cyclic peptides.

Cirac AD, Moiset G, Mika JT, Koçer A, Salvador P, Poolman B, Marrink SJ, Sengupta D. Cirac AD, et al. Among authors: sengupta d. Biophys J. 2011 May 18;100(10):2422-31. doi: 10.1016/j.bpj.2011.03.057. Biophys J. 2011. PMID: 21575576 Free PMC article.

9

Dual action of BPC194: a membrane active peptide killing bacterial cells.

Moiset G, Cirac AD, Stuart MC, Marrink SJ, Sengupta D, Poolman B. Moiset G, et al. Among authors: sengupta d. PLoS One. 2013 Apr 19;8(4):e61541. doi: 10.1371/journal.pone.0061541. Print 2013. PLoS One. 2013. PMID: 23620763 Free PMC article.

10

High-Throughput Simulations of Dimer and Trimer Assembly of Membrane Proteins. The DAFT Approach.

Wassenaar TA, Pluhackova K, Moussatova A, Sengupta D, Marrink SJ, Tieleman DP, Böckmann RA. Wassenaar TA, et al. Among authors: sengupta d. J Chem Theory Comput. 2015 May 12;11(5):2278-91. doi: 10.1021/ct5010092. Epub 2015 Mar 26. J Chem Theory Comput. 2015. PMID: 26574426

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