Kjems J - Search Results

1

Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars.

Sükösd Z, Knudsen B, Vaerum M, Kjems J, Andersen ES. Sükösd Z, et al. Among authors: kjems j. BMC Bioinformatics. 2011 Apr 18;12:103. doi: 10.1186/1471-2105-12-103. BMC Bioinformatics. 2011. PMID: 21501497 Free PMC article.

2

Modern methods for probing RNA structure.

Kjems J, Egebjerg J. Kjems J, et al. Curr Opin Biotechnol. 1998 Feb;9(1):59-65. doi: 10.1016/s0958-1669(98)80085-2. Curr Opin Biotechnol. 1998. PMID: 9503589 Review.

3

Dimerization and template switching in the 5' untranslated region between various subtypes of human immunodeficiency virus type 1.

Andersen ES, Jeeninga RE, Damgaard CK, Berkhout B, Kjems J. Andersen ES, et al. Among authors: kjems j. J Virol. 2003 Mar;77(5):3020-30. doi: 10.1128/jvi.77.5.3020-3030.2003. J Virol. 2003. PMID: 12584327 Free PMC article.

4

RNA interactions in the 5' region of the HIV-1 genome.

Damgaard CK, Andersen ES, Knudsen B, Gorodkin J, Kjems J. Damgaard CK, et al. Among authors: kjems j. J Mol Biol. 2004 Feb 13;336(2):369-79. doi: 10.1016/j.jmb.2003.12.010. J Mol Biol. 2004. PMID: 14757051

5

Role of the trans-activation response element in dimerization of HIV-1 RNA.

Andersen ES, Contera SA, Knudsen B, Damgaard CK, Besenbacher F, Kjems J. Andersen ES, et al. Among authors: kjems j. J Biol Chem. 2004 May 21;279(21):22243-9. doi: 10.1074/jbc.M314326200. Epub 2004 Mar 9. J Biol Chem. 2004. PMID: 15014074 Free article.

6

A genomic selection strategy to identify accessible and dimerization blocking targets in the 5'-UTR of HIV-1 RNA.

Jakobsen MR, Damgaard CK, Andersen ES, Podhajska A, Kjems J. Jakobsen MR, et al. Among authors: kjems j. Nucleic Acids Res. 2004 Apr 23;32(7):e67. doi: 10.1093/nar/gnh064. Nucleic Acids Res. 2004. PMID: 15107482 Free PMC article.

7

Evolutionary rate variation and RNA secondary structure prediction.

Knudsen B, Andersen ES, Damgaard C, Kjems J, Gorodkin J. Knudsen B, et al. Among authors: kjems j. Comput Biol Chem. 2004 Jul;28(3):219-26. doi: 10.1016/j.compbiolchem.2004.04.001. Comput Biol Chem. 2004. PMID: 15261152

8

Semiautomated improvement of RNA alignments.

Andersen ES, Lind-Thomsen A, Knudsen B, Kristensen SE, Havgaard JH, Torarinsson E, Larsen N, Zwieb C, Sestoft P, Kjems J, Gorodkin J. Andersen ES, et al. Among authors: kjems j. RNA. 2007 Nov;13(11):1850-9. doi: 10.1261/rna.215407. Epub 2007 Sep 5. RNA. 2007. PMID: 17804647 Free PMC article.

9

DNA origami design of dolphin-shaped structures with flexible tails.

Andersen ES, Dong M, Nielsen MM, Jahn K, Lind-Thomsen A, Mamdouh W, Gothelf KV, Besenbacher F, Kjems J. Andersen ES, et al. Among authors: kjems j. ACS Nano. 2008 Jun;2(6):1213-8. doi: 10.1021/nn800215j. ACS Nano. 2008. PMID: 19206339

10

Self-assembly of a nanoscale DNA box with a controllable lid.

Andersen ES, Dong M, Nielsen MM, Jahn K, Subramani R, Mamdouh W, Golas MM, Sander B, Stark H, Oliveira CL, Pedersen JS, Birkedal V, Besenbacher F, Gothelf KV, Kjems J. Andersen ES, et al. Among authors: kjems j. Nature. 2009 May 7;459(7243):73-6. doi: 10.1038/nature07971. Nature. 2009. PMID: 19424153

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