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V-REVCOMP: automated high-throughput detection of reverse complementary 16S rRNA gene sequences in large environmental and taxonomic datasets.
Hartmann M, Howes CG, Veldre V, Schneider S, Vaishampayan PA, Yannarell AC, Quince C, Johansson P, Björkroth KJ, Abarenkov K, Hallam SJ, Mohn WW, Nilsson RH. Hartmann M, et al. Among authors: vaishampayan pa. FEMS Microbiol Lett. 2011 Jun;319(2):140-5. doi: 10.1111/j.1574-6968.2011.02274.x. Epub 2011 Apr 27. FEMS Microbiol Lett. 2011. PMID: 21453324
Megraft: a software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes and similar environmental datasets.
Bengtsson J, Hartmann M, Unterseher M, Vaishampayan P, Abarenkov K, Durso L, Bik EM, Garey JR, Eriksson KM, Nilsson RH. Bengtsson J, et al. Res Microbiol. 2012 Jul;163(6-7):407-12. doi: 10.1016/j.resmic.2012.07.001. Epub 2012 Jul 21. Res Microbiol. 2012. PMID: 22824070 Free article.
Bacillus horneckiae sp. nov., isolated from a spacecraft-assembly clean room.
Vaishampayan P, Probst A, Krishnamurthi S, Ghosh S, Osman S, McDowall A, Ruckmani A, Mayilraj S, Venkateswaran K. Vaishampayan P, et al. Int J Syst Evol Microbiol. 2010 May;60(Pt 5):1031-1037. doi: 10.1099/ijs.0.008979-0. Epub 2009 Aug 7. Int J Syst Evol Microbiol. 2010. PMID: 19666815
Diversity of anaerobic microbes in spacecraft assembly clean rooms.
Probst A, Vaishampayan P, Osman S, Moissl-Eichinger C, Andersen GL, Venkateswaran K. Probst A, et al. Appl Environ Microbiol. 2010 May;76(9):2837-45. doi: 10.1128/AEM.02167-09. Epub 2010 Mar 12. Appl Environ Microbiol. 2010. PMID: 20228115 Free PMC article.
62 results