Dopazo J - Search Results

1

B2G-FAR, a species-centered GO annotation repository.

Götz S, Arnold R, Sebastián-León P, Martín-Rodríguez S, Tischler P, Jehl MA, Dopazo J, Rattei T, Conesa A. Götz S, et al. Among authors: dopazo j. Bioinformatics. 2011 Apr 1;27(7):919-24. doi: 10.1093/bioinformatics/btr059. Epub 2011 Feb 18. Bioinformatics. 2011. PMID: 21335611 Free PMC article.

2

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes.

Al-Shahrour F, Díaz-Uriarte R, Dopazo J. Al-Shahrour F, et al. Among authors: dopazo j. Bioinformatics. 2004 Mar 1;20(4):578-80. doi: 10.1093/bioinformatics/btg455. Epub 2004 Jan 22. Bioinformatics. 2004. PMID: 14990455

3

Highly specific and accurate selection of siRNAs for high-throughput functional assays.

Santoyo J, Vaquerizas JM, Dopazo J. Santoyo J, et al. Among authors: dopazo j. Bioinformatics. 2005 Apr 15;21(8):1376-82. doi: 10.1093/bioinformatics/bti196. Epub 2004 Dec 10. Bioinformatics. 2005. PMID: 15591357

4

Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information.

Al-Shahrour F, Díaz-Uriarte R, Dopazo J. Al-Shahrour F, et al. Among authors: dopazo j. Bioinformatics. 2005 Jul 1;21(13):2988-93. doi: 10.1093/bioinformatics/bti457. Epub 2005 Apr 19. Bioinformatics. 2005. PMID: 15840702

5

BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments.

Al-Shahrour F, Minguez P, Tárraga J, Montaner D, Alloza E, Vaquerizas JM, Conde L, Blaschke C, Vera J, Dopazo J. Al-Shahrour F, et al. Among authors: dopazo j. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W472-6. doi: 10.1093/nar/gkl172. Nucleic Acids Res. 2006. PMID: 16845052 Free PMC article.

6

Prophet, a web-based tool for class prediction using microarray data.

Medina I, Montaner D, Tárraga J, Dopazo J. Medina I, et al. Among authors: dopazo j. Bioinformatics. 2007 Feb 1;23(3):390-1. doi: 10.1093/bioinformatics/btl602. Epub 2006 Nov 30. Bioinformatics. 2007. PMID: 17138587

7

FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments.

Al-Shahrour F, Minguez P, Tárraga J, Medina I, Alloza E, Montaner D, Dopazo J. Al-Shahrour F, et al. Among authors: dopazo j. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W91-6. doi: 10.1093/nar/gkm260. Epub 2007 May 3. Nucleic Acids Res. 2007. PMID: 17478504 Free PMC article.

8

The AnnoLite and AnnoLyze programs for comparative annotation of protein structures.

Marti-Renom MA, Rossi A, Al-Shahrour F, Davis FP, Pieper U, Dopazo J, Sali A. Marti-Renom MA, et al. Among authors: dopazo j. BMC Bioinformatics. 2007 May 22;8 Suppl 4(Suppl 4):S4. doi: 10.1186/1471-2105-8-S4-S4. BMC Bioinformatics. 2007. PMID: 17570147 Free PMC article.

9

Functional profiling of microarray experiments using text-mining derived bioentities.

Minguez P, Al-Shahrour F, Montaner D, Dopazo J. Minguez P, et al. Among authors: dopazo j. Bioinformatics. 2007 Nov 15;23(22):3098-9. doi: 10.1093/bioinformatics/btm445. Epub 2007 Sep 13. Bioinformatics. 2007. PMID: 17855415

10

High-throughput functional annotation and data mining with the Blast2GO suite.

Götz S, García-Gómez JM, Terol J, Williams TD, Nagaraj SH, Nueda MJ, Robles M, Talón M, Dopazo J, Conesa A. Götz S, et al. Among authors: dopazo j. Nucleic Acids Res. 2008 Jun;36(10):3420-35. doi: 10.1093/nar/gkn176. Epub 2008 Apr 29. Nucleic Acids Res. 2008. PMID: 18445632 Free PMC article.

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