Agris PF - Search Results

1

The RNA Modification Database, RNAMDB: 2011 update.

Cantara WA, Crain PF, Rozenski J, McCloskey JA, Harris KA, Zhang X, Vendeix FA, Fabris D, Agris PF. Cantara WA, et al. Among authors: agris pf. Nucleic Acids Res. 2011 Jan;39(Database issue):D195-201. doi: 10.1093/nar/gkq1028. Epub 2010 Nov 10. Nucleic Acids Res. 2011. PMID: 21071406 Free PMC article.

2

Synthesis and investigation of the 5-formylcytidine modified, anticodon stem and loop of the human mitochondrial tRNAMet.

Lusic H, Gustilo EM, Vendeix FA, Kaiser R, Delaney MO, Graham WD, Moye VA, Cantara WA, Agris PF, Deiters A. Lusic H, et al. Among authors: agris pf. Nucleic Acids Res. 2008 Nov;36(20):6548-57. doi: 10.1093/nar/gkn703. Epub 2008 Oct 16. Nucleic Acids Res. 2008. PMID: 18927116 Free PMC article.

3

Expanded use of sense codons is regulated by modified cytidines in tRNA.

Cantara WA, Murphy FV 4th, Demirci H, Agris PF. Cantara WA, et al. Among authors: agris pf. Proc Natl Acad Sci U S A. 2013 Jul 2;110(27):10964-9. doi: 10.1073/pnas.1222641110. Epub 2013 Jun 18. Proc Natl Acad Sci U S A. 2013. PMID: 23781103 Free PMC article.

4

Specific RNA-protein interactions detected with saturation transfer difference NMR.

Harris KA, Shekhtman A, Agris PF. Harris KA, et al. Among authors: agris pf. RNA Biol. 2013 Aug;10(8):1307-11. doi: 10.4161/rna.25948. Epub 2013 Jul 30. RNA Biol. 2013. PMID: 23949611 Free PMC article.

5

tRNA's wobble decoding of the genome: 40 years of modification.

Agris PF, Vendeix FA, Graham WD. Agris PF, et al. J Mol Biol. 2007 Feb 9;366(1):1-13. doi: 10.1016/j.jmb.2006.11.046. Epub 2006 Nov 15. J Mol Biol. 2007. PMID: 17187822 Review.

6

Binding of aminoglycoside antibiotics to helix 69 of 23S rRNA.

Scheunemann AE, Graham WD, Vendeix FA, Agris PF. Scheunemann AE, et al. Among authors: agris pf. Nucleic Acids Res. 2010 May;38(9):3094-105. doi: 10.1093/nar/gkp1253. Epub 2010 Jan 27. Nucleic Acids Res. 2010. PMID: 20110260 Free PMC article.

7

A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine.

Vangaveti S, Cantara WA, Spears JL, DeMirci H, Murphy FV 4th, Ranganathan SV, Sarachan KL, Agris PF. Vangaveti S, et al. Among authors: agris pf. J Mol Biol. 2020 Feb 14;432(4):913-929. doi: 10.1016/j.jmb.2019.12.016. Epub 2020 Jan 14. J Mol Biol. 2020. PMID: 31945376 Free PMC article.

8

The structure of the human tRNALys3 anticodon bound to the HIV genome is stabilized by modified nucleosides and adjacent mismatch base pairs.

Bilbille Y, Vendeix FA, Guenther R, Malkiewicz A, Ariza X, Vilarrasa J, Agris PF. Bilbille Y, et al. Among authors: agris pf. Nucleic Acids Res. 2009 Jun;37(10):3342-53. doi: 10.1093/nar/gkp187. Epub 2009 Mar 26. Nucleic Acids Res. 2009. PMID: 19324888 Free PMC article.

9

Free energy calculation of modified base-pair formation in explicit solvent: A predictive model.

Vendeix FA, Munoz AM, Agris PF. Vendeix FA, et al. Among authors: agris pf. RNA. 2009 Dec;15(12):2278-87. doi: 10.1261/rna.1734309. Epub 2009 Oct 27. RNA. 2009. PMID: 19861423 Free PMC article.

10

YrdC exhibits properties expected of a subunit for a tRNA threonylcarbamoyl transferase.

Harris KA, Jones V, Bilbille Y, Swairjo MA, Agris PF. Harris KA, et al. Among authors: agris pf. RNA. 2011 Sep;17(9):1678-87. doi: 10.1261/rna.2592411. Epub 2011 Jul 20. RNA. 2011. PMID: 21775474 Free PMC article.

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