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Page 1
Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000.
Feil H, Feil WS, Chain P, Larimer F, DiBartolo G, Copeland A, Lykidis A, Trong S, Nolan M, Goltsman E, Thiel J, Malfatti S, Loper JE, Lapidus A, Detter JC, Land M, Richardson PM, Kyrpides NC, Ivanova N, Lindow SE. Feil H, et al. Among authors: copeland a. Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):11064-9. doi: 10.1073/pnas.0504930102. Epub 2005 Jul 25. Proc Natl Acad Sci U S A. 2005. PMID: 16043691 Free PMC article.
The genome of the obligately intracellular bacterium Ehrlichia canis reveals themes of complex membrane structure and immune evasion strategies.
Mavromatis K, Doyle CK, Lykidis A, Ivanova N, Francino MP, Chain P, Shin M, Malfatti S, Larimer F, Copeland A, Detter JC, Land M, Richardson PM, Yu XJ, Walker DH, McBride JW, Kyrpides NC. Mavromatis K, et al. Among authors: copeland a. J Bacteriol. 2006 Jun;188(11):4015-23. doi: 10.1128/JB.01837-05. J Bacteriol. 2006. PMID: 16707693 Free PMC article.
Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX.
Lykidis A, Mavromatis K, Ivanova N, Anderson I, Land M, DiBartolo G, Martinez M, Lapidus A, Lucas S, Copeland A, Richardson P, Wilson DB, Kyrpides N. Lykidis A, et al. Among authors: copeland a. J Bacteriol. 2007 Mar;189(6):2477-86. doi: 10.1128/JB.01899-06. Epub 2007 Jan 5. J Bacteriol. 2007. PMID: 17209016 Free PMC article.
Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction.
Anderson I, Rodriguez J, Susanti D, Porat I, Reich C, Ulrich LE, Elkins JG, Mavromatis K, Lykidis A, Kim E, Thompson LS, Nolan M, Land M, Copeland A, Lapidus A, Lucas S, Detter C, Zhulin IB, Olsen GJ, Whitman W, Mukhopadhyay B, Bristow J, Kyrpides N. Anderson I, et al. Among authors: copeland a. J Bacteriol. 2008 Apr;190(8):2957-65. doi: 10.1128/JB.01949-07. Epub 2008 Feb 8. J Bacteriol. 2008. PMID: 18263724 Free PMC article.
High-resolution metagenomics targets specific functional types in complex microbial communities.
Kalyuzhnaya MG, Lapidus A, Ivanova N, Copeland AC, McHardy AC, Szeto E, Salamov A, Grigoriev IV, Suciu D, Levine SR, Markowitz VM, Rigoutsos I, Tringe SG, Bruce DC, Richardson PM, Lidstrom ME, Chistoserdova L. Kalyuzhnaya MG, et al. Among authors: copeland ac. Nat Biotechnol. 2008 Sep;26(9):1029-34. doi: 10.1038/nbt.1488. Nat Biotechnol. 2008. PMID: 18711340
A bioinformatician's guide to metagenomics.
Kunin V, Copeland A, Lapidus A, Mavromatis K, Hugenholtz P. Kunin V, et al. Among authors: copeland a. Microbiol Mol Biol Rev. 2008 Dec;72(4):557-78, Table of Contents. doi: 10.1128/MMBR.00009-08. Microbiol Mol Biol Rev. 2008. PMID: 19052320 Free PMC article. Review.
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea.
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, Kunin V, Goodwin L, Wu M, Tindall BJ, Hooper SD, Pati A, Lykidis A, Spring S, Anderson IJ, D'haeseleer P, Zemla A, Singer M, Lapidus A, Nolan M, Copeland A, Han C, Chen F, Cheng JF, Lucas S, Kerfeld C, Lang E, Gronow S, Chain P, Bruce D, Rubin EM, Kyrpides NC, Klenk HP, Eisen JA. Wu D, et al. Among authors: copeland a. Nature. 2009 Dec 24;462(7276):1056-60. doi: 10.1038/nature08656. Nature. 2009. PMID: 20033048 Free PMC article.
The genome sequence of Methanohalophilus mahii SLP(T) reveals differences in the energy metabolism among members of the Methanosarcinaceae inhabiting freshwater and saline environments.
Spring S, Scheuner C, Lapidus A, Lucas S, Glavina Del Rio T, Tice H, Copeland A, Cheng JF, Chen F, Nolan M, Saunders E, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Lykidis A, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Goodwin L, Detter JC, Brettin T, Rohde M, Göker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Spring S, et al. Among authors: copeland a. Archaea. 2010 Dec 23;2010:690737. doi: 10.1155/2010/690737. Archaea. 2010. PMID: 21234345 Free PMC article.
480 results