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Benchmarking multi-rate codon models.
Delport W, Scheffler K, Gravenor MB, Muse SV, Kosakovsky Pond S. Delport W, et al. Among authors: kosakovsky pond s. PLoS One. 2010 Jul 21;5(7):e11587. doi: 10.1371/journal.pone.0011587. PLoS One. 2010. PMID: 20657773 Free PMC article.
GARD: a genetic algorithm for recombination detection.
Kosakovsky Pond SL, Posada D, Gravenor MB, Woelk CH, Frost SD. Kosakovsky Pond SL, et al. Bioinformatics. 2006 Dec 15;22(24):3096-8. doi: 10.1093/bioinformatics/btl474. Epub 2006 Nov 16. Bioinformatics. 2006. PMID: 17110367
HIV-specific probabilistic models of protein evolution.
Nickle DC, Heath L, Jensen MA, Gilbert PB, Mullins JI, Kosakovsky Pond SL. Nickle DC, et al. PLoS One. 2007 Jun 6;2(6):e503. doi: 10.1371/journal.pone.0000503. PLoS One. 2007. PMID: 17551583 Free PMC article.
156 results