Ogata K - Search Results

1

Lead generation and optimization based on protein-ligand complementarity.

Ogata K, Isomura T, Kawata S, Yamashita H, Kubodera H, Wodak SJ. Ogata K, et al. Molecules. 2010 Jun 17;15(6):4382-400. doi: 10.3390/molecules15064382. Molecules. 2010. PMID: 20657448 Free PMC article.

2

Conserved water molecules in MHC class-I molecules and their putative structural and functional roles.

Ogata K, Wodak SJ. Ogata K, et al. Protein Eng. 2002 Aug;15(8):697-705. doi: 10.1093/protein/15.8.697. Protein Eng. 2002. PMID: 12364585

3

Activators of cylindrical proteases as antimicrobials: identification and development of small molecule activators of ClpP protease.

Leung E, Datti A, Cossette M, Goodreid J, McCaw SE, Mah M, Nakhamchik A, Ogata K, El Bakkouri M, Cheng YQ, Wodak SJ, Eger BT, Pai EF, Liu J, Gray-Owen S, Batey RA, Houry WA. Leung E, et al. Among authors: ogata k. Chem Biol. 2011 Sep 23;18(9):1167-78. doi: 10.1016/j.chembiol.2011.07.023. Chem Biol. 2011. PMID: 21944755

4

CRYBA4, a novel human cataract gene, is also involved in microphthalmia.

Billingsley G, Santhiya ST, Paterson AD, Ogata K, Wodak S, Hosseini SM, Manisastry SM, Vijayalakshmi P, Gopinath PM, Graw J, Héon E. Billingsley G, et al. Among authors: ogata k. Am J Hum Genet. 2006 Oct;79(4):702-9. doi: 10.1086/507712. Epub 2006 Aug 17. Am J Hum Genet. 2006. PMID: 16960806 Free PMC article.

5

An electrostatic switch displaces phosphatidylinositol phosphate kinases from the membrane during phagocytosis.

Fairn GD, Ogata K, Botelho RJ, Stahl PD, Anderson RA, De Camilli P, Meyer T, Wodak S, Grinstein S. Fairn GD, et al. Among authors: ogata k. J Cell Biol. 2009 Nov 30;187(5):701-14. doi: 10.1083/jcb.200909025. J Cell Biol. 2009. PMID: 19951917 Free PMC article.

6

Automatic sequence design of major histocompatibility complex class I binding peptides impairing CD8+ T cell recognition.

Ogata K, Jaramillo A, Cohen W, Briand JP, Connan F, Choppin J, Muller S, Wodak SJ. Ogata K, et al. J Biol Chem. 2003 Jan 10;278(2):1281-90. doi: 10.1074/jbc.M206853200. Epub 2002 Oct 30. J Biol Chem. 2003. PMID: 12411444 Free article.

7

Modeling the three-dimensional structure of H+-ATPase of Neurospora crassa.

Radresa O, Ogata K, Wodak S, Ruysschaert JM, Goormaghtigh E. Radresa O, et al. Among authors: ogata k. Eur J Biochem. 2002 Nov;269(21):5246-58. doi: 10.1046/j.1432-1033.2002.03236.x. Eur J Biochem. 2002. PMID: 12392557 Free article.

8

A Monte Carlo sampling method of amino acid sequences adaptable to given main-chain atoms in the proteins.

Ogata K, Soejima K, Higo J. Ogata K, et al. J Biochem. 2006 Oct;140(4):543-52. doi: 10.1093/jb/mvj184. Epub 2006 Aug 31. J Biochem. 2006. PMID: 16945938

9

Direct binding targets of the stringent response alarmone (p)ppGpp.

Kanjee U, Ogata K, Houry WA. Kanjee U, et al. Among authors: ogata k. Mol Microbiol. 2012 Sep;85(6):1029-43. doi: 10.1111/j.1365-2958.2012.08177.x. Epub 2012 Aug 2. Mol Microbiol. 2012. PMID: 22812515 Free article. Review.

10

Mutations in chaperonin-like BBS genes are a major contributor to disease development in a multiethnic Bardet-Biedl syndrome patient population.

Billingsley G, Bin J, Fieggen KJ, Duncan JL, Gerth C, Ogata K, Wodak SS, Traboulsi EI, Fishman GA, Paterson A, Chitayat D, Knueppel T, Millán JM, Mitchell GA, Deveault C, Héon E. Billingsley G, et al. Among authors: ogata k. J Med Genet. 2010 Jul;47(7):453-63. doi: 10.1136/jmg.2009.073205. Epub 2010 May 14. J Med Genet. 2010. PMID: 20472660

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