Dubchak I - Search Results

1

A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites.

Khoueiry P, Rothbächer U, Ohtsuka Y, Daian F, Frangulian E, Roure A, Dubchak I, Lemaire P. Khoueiry P, et al. Among authors: dubchak i. Curr Biol. 2010 May 11;20(9):792-802. doi: 10.1016/j.cub.2010.03.063. Epub 2010 Apr 29. Curr Biol. 2010. PMID: 20434338 Free article.

2

rVista for comparative sequence-based discovery of functional transcription factor binding sites.

Loots GG, Ovcharenko I, Pachter L, Dubchak I, Rubin EM. Loots GG, et al. Among authors: dubchak i. Genome Res. 2002 May;12(5):832-9. doi: 10.1101/gr.225502. Genome Res. 2002. PMID: 11997350 Free PMC article.

3

Combinatorial regulation of endothelial gene expression by ets and forkhead transcription factors.

De Val S, Chi NC, Meadows SM, Minovitsky S, Anderson JP, Harris IS, Ehlers ML, Agarwal P, Visel A, Xu SM, Pennacchio LA, Dubchak I, Krieg PA, Stainier DY, Black BL. De Val S, et al. Among authors: dubchak i. Cell. 2008 Dec 12;135(6):1053-64. doi: 10.1016/j.cell.2008.10.049. Cell. 2008. PMID: 19070576 Free PMC article.

4

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.

Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R, Meisel RP, Couronne O, Hua S, Smith MA, Zhang P, Liu J, Bussemaker HJ, van Batenburg MF, Howells SL, Scherer SE, Sodergren E, Matthews BB, Crosby MA, Schroeder AJ, Ortiz-Barrientos D, Rives CM, Metzker ML, Muzny DM, Scott G, Steffen D, Wheeler DA, Worley KC, Havlak P, Durbin KJ, Egan A, Gill R, Hume J, Morgan MB, Miner G, Hamilton C, Huang Y, Waldron L, Verduzco D, Clerc-Blankenburg KP, Dubchak I, Noor MA, Anderson W, White KP, Clark AG, Schaeffer SW, Gelbart W, Weinstock GM, Gibbs RA. Richards S, et al. Among authors: dubchak i. Genome Res. 2005 Jan;15(1):1-18. doi: 10.1101/gr.3059305. Genome Res. 2005. PMID: 15632085 Free PMC article.

5

The computational challenges of applying comparative-based computational methods to whole genomes.

Dubchak I, Pachter L. Dubchak I, et al. Brief Bioinform. 2002 Mar;3(1):18-22. doi: 10.1093/bib/3.1.18. Brief Bioinform. 2002. PMID: 12002220

6

SNPs in putative regulatory regions identified by human mouse comparative sequencing and transcription factor binding site data.

Banerjee P, Bahlo M, Schwartz JR, Loots GG, Houston KA, Dubchak I, Speed TP, Rubin EM. Banerjee P, et al. Among authors: dubchak i. Mamm Genome. 2002 Oct;13(10):554-7. doi: 10.1007/s00335-002-2169-4. Mamm Genome. 2002. PMID: 12420132 No abstract available.

7

Strategies and tools for whole-genome alignments.

Couronne O, Poliakov A, Bray N, Ishkhanov T, Ryaboy D, Rubin E, Pachter L, Dubchak I. Couronne O, et al. Among authors: dubchak i. Genome Res. 2003 Jan;13(1):73-80. doi: 10.1101/gr.762503. Genome Res. 2003. PMID: 12529308 Free PMC article.

8

AVID: A global alignment program.

Bray N, Dubchak I, Pachter L. Bray N, et al. Among authors: dubchak i. Genome Res. 2003 Jan;13(1):97-102. doi: 10.1101/gr.789803. Genome Res. 2003. PMID: 12529311 Free PMC article.

9

Active conservation of noncoding sequences revealed by three-way species comparisons.

Dubchak I, Brudno M, Loots GG, Pachter L, Mayor C, Rubin EM, Frazer KA. Dubchak I, et al. Genome Res. 2000 Sep;10(9):1304-6. doi: 10.1101/gr.142200. Genome Res. 2000. PMID: 10984448 Free PMC article.

10

Automated whole-genome multiple alignment of rat, mouse, and human.

Brudno M, Poliakov A, Salamov A, Cooper GM, Sidow A, Rubin EM, Solovyev V, Batzoglou S, Dubchak I. Brudno M, et al. Among authors: dubchak i. Genome Res. 2004 Apr;14(4):685-92. doi: 10.1101/gr.2067704. Genome Res. 2004. PMID: 15060011 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

113 results

Search Page