De Paepe A - Search Results

1

methGraph: a genome visualization tool for PCR-based methylation assays.

Lefever S, Hoebeeck J, Pattyn F, Tusnády G, De Paepe A, Speleman F, Arányi T, Vandesompele J. Lefever S, et al. Among authors: de paepe a. Epigenetics. 2010 Feb 16;5(2):159-63. doi: 10.4161/epi.5.2.11161. Epub 2010 Feb 11. Epigenetics. 2010. PMID: 20160504 Free article.

2

RTPrimerDB: the real-time PCR primer and probe database, major update 2006.

Pattyn F, Robbrecht P, De Paepe A, Speleman F, Vandesompele J. Pattyn F, et al. Among authors: de paepe a. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D684-8. doi: 10.1093/nar/gkj155. Nucleic Acids Res. 2006. PMID: 16381959 Free PMC article.

3

methBLAST and methPrimerDB: web-tools for PCR based methylation analysis.

Pattyn F, Hoebeeck J, Robbrecht P, Michels E, De Paepe A, Bottu G, Coornaert D, Herzog R, Speleman F, Vandesompele J. Pattyn F, et al. Among authors: de paepe a. BMC Bioinformatics. 2006 Nov 9;7:496. doi: 10.1186/1471-2105-7-496. BMC Bioinformatics. 2006. PMID: 17094804 Free PMC article.

4

Aberrant methylation of candidate tumor suppressor genes in neuroblastoma.

Hoebeeck J, Michels E, Pattyn F, Combaret V, Vermeulen J, Yigit N, Hoyoux C, Laureys G, De Paepe A, Speleman F, Vandesompele J. Hoebeeck J, et al. Among authors: de paepe a. Cancer Lett. 2009 Jan 18;273(2):336-46. doi: 10.1016/j.canlet.2008.08.019. Epub 2008 Sep 25. Cancer Lett. 2009. PMID: 18819746

5

Quantification of MYCN, DDX1, and NAG gene copy number in neuroblastoma using a real-time quantitative PCR assay.

De Preter K, Speleman F, Combaret V, Lunec J, Laureys G, Eussen BH, Francotte N, Board J, Pearson AD, De Paepe A, Van Roy N, Vandesompele J. De Preter K, et al. Among authors: de paepe a. Mod Pathol. 2002 Feb;15(2):159-66. doi: 10.1038/modpathol.3880508. Mod Pathol. 2002. PMID: 11850545

6

Elimination of primer-dimer artifacts and genomic coamplification using a two-step SYBR green I real-time RT-PCR.

Vandesompele J, De Paepe A, Speleman F. Vandesompele J, et al. Among authors: de paepe a. Anal Biochem. 2002 Apr 1;303(1):95-8. doi: 10.1006/abio.2001.5564. Anal Biochem. 2002. PMID: 11906156 No abstract available.

7

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.

Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F. Vandesompele J, et al. Among authors: de paepe a, de preter k. Genome Biol. 2002 Jun 18;3(7):RESEARCH0034. doi: 10.1186/gb-2002-3-7-research0034. Epub 2002 Jun 18. Genome Biol. 2002. PMID: 12184808 Free PMC article.

8

RTPrimerDB: the real-time PCR primer and probe database.

Pattyn F, Speleman F, De Paepe A, Vandesompele J. Pattyn F, et al. Among authors: de paepe a. Nucleic Acids Res. 2003 Jan 1;31(1):122-3. doi: 10.1093/nar/gkg011. Nucleic Acids Res. 2003. PMID: 12519963 Free PMC article.

9

Application of laser capture microdissection in genetic analysis of neuroblastoma and neuroblastoma precursor cells.

De Preter K, Vandesompele J, Heimann P, Kockx MM, Van Gele M, Hoebeeck J, De Smet E, Demarche M, Laureys G, Van Roy N, De Paepe A, Speleman F. De Preter K, et al. Among authors: de paepe a, de smet e. Cancer Lett. 2003 Jul 18;197(1-2):53-61. doi: 10.1016/s0304-3835(03)00084-3. Cancer Lett. 2003. PMID: 12880960 Review.

10

Combined subtractive cDNA cloning and array CGH: an efficient approach for identification of overexpressed genes in DNA amplicons.

De Preter K, Pattyn F, Berx G, Strumane K, Menten B, Van Roy F, De Paepe A, Speleman F, Vandesompele J. De Preter K, et al. Among authors: de paepe a. BMC Genomics. 2004 Feb 3;5(1):11. doi: 10.1186/1471-2164-5-11. BMC Genomics. 2004. PMID: 15018647 Free PMC article.

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