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SNP-o-matic.
Manske HM, Kwiatkowski DP. Manske HM, et al. Among authors: kwiatkowski dp. Bioinformatics. 2009 Sep 15;25(18):2434-5. doi: 10.1093/bioinformatics/btp403. Epub 2009 Jul 2. Bioinformatics. 2009. PMID: 19574284 Free PMC article.
A genotype calling algorithm for the Illumina BeadArray platform.
Teo YY, Inouye M, Small KS, Gwilliam R, Deloukas P, Kwiatkowski DP, Clark TG. Teo YY, et al. Among authors: kwiatkowski dp. Bioinformatics. 2007 Oct 15;23(20):2741-6. doi: 10.1093/bioinformatics/btm443. Epub 2007 Sep 10. Bioinformatics. 2007. PMID: 17846035 Free PMC article.
LookSeq: a browser-based viewer for deep sequencing data.
Manske HM, Kwiatkowski DP. Manske HM, et al. Among authors: kwiatkowski dp. Genome Res. 2009 Nov;19(11):2125-32. doi: 10.1101/gr.093443.109. Epub 2009 Aug 13. Genome Res. 2009. PMID: 19679872 Free PMC article.
SnoopCGH: software for visualizing comparative genomic hybridization data.
Almagro-Garcia J, Manske M, Carret C, Campino S, Auburn S, Macinnis BL, Maslen G, Pain A, Newbold CI, Kwiatkowski DP, Clark TG. Almagro-Garcia J, et al. Among authors: kwiatkowski dp. Bioinformatics. 2009 Oct 15;25(20):2732-3. doi: 10.1093/bioinformatics/btp488. Epub 2009 Aug 16. Bioinformatics. 2009. PMID: 19687029 Free PMC article.
A Bayesian approach using covariance of single nucleotide polymorphism data to detect differences in linkage disequilibrium patterns between groups of individuals.
Clark TG, Campino SG, Anastasi E, Auburn S, Teo YY, Small K, Rockett KA, Kwiatkowski DP, Holmes CC. Clark TG, et al. Among authors: kwiatkowski dp. Bioinformatics. 2010 Aug 15;26(16):1999-2003. doi: 10.1093/bioinformatics/btq327. Epub 2010 Jun 16. Bioinformatics. 2010. PMID: 20554688 Free PMC article.
Population genetic analysis of Plasmodium falciparum parasites using a customized Illumina GoldenGate genotyping assay.
Campino S, Auburn S, Kivinen K, Zongo I, Ouedraogo JB, Mangano V, Djimde A, Doumbo OK, Kiara SM, Nzila A, Borrmann S, Marsh K, Michon P, Mueller I, Siba P, Jiang H, Su XZ, Amaratunga C, Socheat D, Fairhurst RM, Imwong M, Anderson T, Nosten F, White NJ, Gwilliam R, Deloukas P, MacInnis B, Newbold CI, Rockett K, Clark TG, Kwiatkowski DP. Campino S, et al. Among authors: kwiatkowski dp. PLoS One. 2011;6(6):e20251. doi: 10.1371/journal.pone.0020251. Epub 2011 Jun 6. PLoS One. 2011. PMID: 21673999 Free PMC article.
212 results