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Establishment of a pipeline to analyse non-synonymous SNPs in Bos taurus.
Lee MA, Keane OM, Glass BC, Manley TR, Cullen NG, Dodds KG, McCulloch AF, Morris CA, Schreiber M, Warren J, Zadissa A, Wilson T, McEwan JC. Lee MA, et al. Among authors: mcewan jc. BMC Genomics. 2006 Nov 26;7:298. doi: 10.1186/1471-2164-7-298. BMC Genomics. 2006. PMID: 17125523 Free PMC article.
A multiway analysis for identifying high integrity bovine BACs.
Ratnakumar A, Barris W, McWilliam S, Brauning R, McEwan JC, Snelling WM, Dalrymple BP. Ratnakumar A, et al. BMC Genomics. 2009 Jan 23;10:46. doi: 10.1186/1471-2164-10-46. BMC Genomics. 2009. PMID: 19166603 Free PMC article.
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.
Bovine HapMap Consortium; Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, Weinstock GM, Wheeler DA, Ajmone-Marsan P, Boettcher PJ, Caetano AR, Garcia JF, Hanotte O, Mariani P, Skow LC, Sonstegard TS, Williams JL, Diallo B, Hailemariam L, Martinez ML, Morris CA, Silva LO, Spelman RJ, Mulatu W, Zhao K, Abbey CA, Agaba M, Araujo FR, Bunch RJ, Burton J, Gorni C, Olivier H, Harrison BE, Luff B, Machado MA, Mwakaya J, Plastow G, Sim W, Smith T, Thomas MB, Valentini A, Williams P, Womack J, Woolliams JA, Liu Y, Qin X, Worley KC, Gao C, Jiang H, Moore SS, Ren Y, Song XZ, Bustamante CD, Hernandez RD, Muzny DM, Patil S, San Lucas A, Fu Q, Kent MP, Vega R, Matukumalli A, McWilliam S, Sclep G, Bryc K, Choi J, Gao H, Grefenstette JJ, Murdoch B, Stella A, Villa-Angulo R, Wright M, Aerts J, Jann O, Negrini R, Goddard ME, Hayes BJ, Bradley DG, Barbosa da Silva M, Lau LP, Liu GE, Lynn DJ, Panzitta F, Dodds KG. Bovine HapMap Consortium, et al. Among authors: mcewan jc. Science. 2009 Apr 24;324(5926):528-32. doi: 10.1126/science.1167936. Science. 2009. PMID: 19390050 Free PMC article.
An examination of positive selection and changing effective population size in Angus and Holstein cattle populations (Bos taurus) using a high density SNP genotyping platform and the contribution of ancient polymorphism to genomic diversity in Domestic cattle.
MacEachern S, Hayes B, McEwan J, Goddard M. MacEachern S, et al. Among authors: mcewan j. BMC Genomics. 2009 Apr 24;10:181. doi: 10.1186/1471-2164-10-181. BMC Genomics. 2009. PMID: 19393053 Free PMC article.
An entropy-reducing data representation approach for bioinformatic data.
McCulloch AF, Jauregui R, Maclean PH, Ashby RL, Moraga RA, Laugraud A, Brauning R, Dodds KG, McEwan JC. McCulloch AF, et al. Database (Oxford). 2018 Jan 1;2018:bay029. doi: 10.1093/database/bay029. Database (Oxford). 2018. PMID: 29688382 Free PMC article.
353 results