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The Arabidopsis Information Resource (TAIR): gene structure and function annotation.
Swarbreck D, Wilks C, Lamesch P, Berardini TZ, Garcia-Hernandez M, Foerster H, Li D, Meyer T, Muller R, Ploetz L, Radenbaugh A, Singh S, Swing V, Tissier C, Zhang P, Huala E. Swarbreck D, et al. Among authors: zhang p. Nucleic Acids Res. 2008 Jan;36(Database issue):D1009-14. doi: 10.1093/nar/gkm965. Epub 2007 Nov 5. Nucleic Acids Res. 2008. PMID: 17986450 Free PMC article.
TAIR: a resource for integrated Arabidopsis data.
Garcia-Hernandez M, Berardini TZ, Chen G, Crist D, Doyle A, Huala E, Knee E, Lambrecht M, Miller N, Mueller LA, Mundodi S, Reiser L, Rhee SY, Scholl R, Tacklind J, Weems DC, Wu Y, Xu I, Yoo D, Yoon J, Zhang P. Garcia-Hernandez M, et al. Among authors: zhang p. Funct Integr Genomics. 2002 Nov;2(6):239-53. doi: 10.1007/s10142-002-0077-z. Epub 2002 Oct 3. Funct Integr Genomics. 2002. PMID: 12444417 Review.
The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community.
Rhee SY, Beavis W, Berardini TZ, Chen G, Dixon D, Doyle A, Garcia-Hernandez M, Huala E, Lander G, Montoya M, Miller N, Mueller LA, Mundodi S, Reiser L, Tacklind J, Weems DC, Wu Y, Xu I, Yoo D, Yoon J, Zhang P. Rhee SY, et al. Among authors: zhang p. Nucleic Acids Res. 2003 Jan 1;31(1):224-8. doi: 10.1093/nar/gkg076. Nucleic Acids Res. 2003. PMID: 12519987 Free PMC article.
Functional annotation of the Arabidopsis genome using controlled vocabularies.
Berardini TZ, Mundodi S, Reiser L, Huala E, Garcia-Hernandez M, Zhang P, Mueller LA, Yoon J, Doyle A, Lander G, Moseyko N, Yoo D, Xu I, Zoeckler B, Montoya M, Miller N, Weems D, Rhee SY. Berardini TZ, et al. Among authors: zhang p. Plant Physiol. 2004 Jun;135(2):745-55. doi: 10.1104/pp.104.040071. Epub 2004 Jun 1. Plant Physiol. 2004. PMID: 15173566 Free PMC article.
MetaCyc: a multiorganism database of metabolic pathways and enzymes.
Caspi R, Foerster H, Fulcher CA, Hopkinson R, Ingraham J, Kaipa P, Krummenacker M, Paley S, Pick J, Rhee SY, Tissier C, Zhang P, Karp PD. Caspi R, et al. Among authors: zhang p. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D511-6. doi: 10.1093/nar/gkj128. Nucleic Acids Res. 2006. PMID: 16381923 Free PMC article.
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.
Caspi R, Altman T, Billington R, Dreher K, Foerster H, Fulcher CA, Holland TA, Keseler IM, Kothari A, Kubo A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Subhraveti P, Weaver DS, Weerasinghe D, Zhang P, Karp PD. Caspi R, et al. Among authors: zhang p. Nucleic Acids Res. 2014 Jan;42(Database issue):D459-71. doi: 10.1093/nar/gkt1103. Epub 2013 Nov 12. Nucleic Acids Res. 2014. PMID: 24225315 Free PMC article.
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