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The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyère C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro F, Anthouard V, Vico V, Del Fabbro C, Alaux M, Di Gaspero G, Dumas V, Felice N, Paillard S, Juman I, Moroldo M, Scalabrin S, Canaguier A, Le Clainche I, Malacrida G, Durand E, Pesole G, Laucou V, Chatelet P, Merdinoglu D, Delledonne M, Pezzotti M, Lecharny A, Scarpelli C, Artiguenave F, Pè ME, Valle G, Morgante M, Caboche M, Adam-Blondon AF, Weissenbach J, Quétier F, Wincker P; French-Italian Public Consortium for Grapevine Genome Characterization. Jaillon O, et al. Among authors: scalabrin s. Nature. 2007 Sep 27;449(7161):463-7. doi: 10.1038/nature06148. Epub 2007 Aug 26. Nature. 2007. PMID: 17721507
Mapping and sequencing complex genomes: let's get physical!
Meyers BC, Scalabrin S, Morgante M. Meyers BC, et al. Among authors: scalabrin s. Nat Rev Genet. 2004 Aug;5(8):578-88. doi: 10.1038/nrg1404. Nat Rev Genet. 2004. PMID: 15266340 Review. No abstract available.
A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance.
Moroldo M, Paillard S, Marconi R, Fabrice L, Canaguier A, Cruaud C, De Berardinis V, Guichard C, Brunaud V, Le Clainche I, Scalabrin S, Testolin R, Di Gaspero G, Morgante M, Adam-Blondon AF. Moroldo M, et al. Among authors: scalabrin s. BMC Plant Biol. 2008 Jun 13;8:66. doi: 10.1186/1471-2229-8-66. BMC Plant Biol. 2008. PMID: 18554400 Free PMC article.
Automated FingerPrint Background removal: FPB.
Scalabrin S, Morgante M, Policriti A. Scalabrin S, et al. BMC Bioinformatics. 2009 Apr 30;10:127. doi: 10.1186/1471-2105-10-127. BMC Bioinformatics. 2009. PMID: 19405935 Free PMC article.
A 3,000-loci transcription map of chromosome 3B unravels the structural and functional features of gene islands in hexaploid wheat.
Rustenholz C, Choulet F, Laugier C, Safár J, Simková H, Dolezel J, Magni F, Scalabrin S, Cattonaro F, Vautrin S, Bellec A, Bergès H, Feuillet C, Paux E. Rustenholz C, et al. Among authors: scalabrin s. Plant Physiol. 2011 Dec;157(4):1596-608. doi: 10.1104/pp.111.183921. Epub 2011 Oct 27. Plant Physiol. 2011. PMID: 22034626 Free PMC article.
A physical, genetic and functional sequence assembly of the barley genome.
International Barley Genome Sequencing Consortium; Mayer KF, Waugh R, Brown JW, Schulman A, Langridge P, Platzer M, Fincher GB, Muehlbauer GJ, Sato K, Close TJ, Wise RP, Stein N. International Barley Genome Sequencing Consortium, et al. Nature. 2012 Nov 29;491(7426):711-6. doi: 10.1038/nature11543. Epub 2012 Oct 17. Nature. 2012. PMID: 23075845 Free article.
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution.
International Peach Genome Initiative; Verde I, Abbott AG, Scalabrin S, Jung S, Shu S, Marroni F, Zhebentyayeva T, Dettori MT, Grimwood J, Cattonaro F, Zuccolo A, Rossini L, Jenkins J, Vendramin E, Meisel LA, Decroocq V, Sosinski B, Prochnik S, Mitros T, Policriti A, Cipriani G, Dondini L, Ficklin S, Goodstein DM, Xuan P, Del Fabbro C, Aramini V, Copetti D, Gonzalez S, Horner DS, Falchi R, Lucas S, Mica E, Maldonado J, Lazzari B, Bielenberg D, Pirona R, Miculan M, Barakat A, Testolin R, Stella A, Tartarini S, Tonutti P, Arús P, Orellana A, Wells C, Main D, Vizzotto G, Silva H, Salamini F, Schmutz J, Morgante M, Rokhsar DS. International Peach Genome Initiative, et al. Among authors: scalabrin s. Nat Genet. 2013 May;45(5):487-94. doi: 10.1038/ng.2586. Epub 2013 Mar 24. Nat Genet. 2013. PMID: 23525075 Free article.
53 results