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An annotated cDNA library of juvenile Euprymna scolopes with and without colonization by the symbiont Vibrio fischeri.
Chun CK, Scheetz TE, Bonaldo Mde F, Brown B, Clemens A, Crookes-Goodson WJ, Crouch K, DeMartini T, Eyestone M, Goodson MS, Janssens B, Kimbell JL, Koropatnick TA, Kucaba T, Smith C, Stewart JJ, Tong D, Troll JV, Webster S, Winhall-Rice J, Yap C, Casavant TL, McFall-Ngai MJ, Soares MB. Chun CK, et al. Among authors: soares mb. BMC Genomics. 2006 Jun 16;7:154. doi: 10.1186/1471-2164-7-154. BMC Genomics. 2006. PMID: 16780587 Free PMC article.
Effects of colonization, luminescence, and autoinducer on host transcription during development of the squid-vibrio association.
Chun CK, Troll JV, Koroleva I, Brown B, Manzella L, Snir E, Almabrazi H, Scheetz TE, Bonaldo Mde F, Casavant TL, Soares MB, Ruby EG, McFall-Ngai MJ. Chun CK, et al. Among authors: soares mb. Proc Natl Acad Sci U S A. 2008 Aug 12;105(32):11323-8. doi: 10.1073/pnas.0802369105. Epub 2008 Aug 5. Proc Natl Acad Sci U S A. 2008. PMID: 18682555 Free PMC article.
Large-scale gene discovery in human airway epithelia reveals novel transcripts.
Scheetz TE, Zabner J, Welsh MJ, Coco J, Eyestone Mde F, Bonaldo M, Kucaba T, Casavant TL, Soares MB, McCray PB Jr. Scheetz TE, et al. Among authors: soares mb. Physiol Genomics. 2004 Mar 12;17(1):69-77. doi: 10.1152/physiolgenomics.00188.2003. Physiol Genomics. 2004. PMID: 14701920
Transcriptional patterns in both host and bacterium underlie a daily rhythm of anatomical and metabolic change in a beneficial symbiosis.
Wier AM, Nyholm SV, Mandel MJ, Massengo-Tiassé RP, Schaefer AL, Koroleva I, Splinter-Bondurant S, Brown B, Manzella L, Snir E, Almabrazi H, Scheetz TE, Bonaldo Mde F, Casavant TL, Soares MB, Cronan JE, Reed JL, Ruby EG, McFall-Ngai MJ. Wier AM, et al. Among authors: soares mb. Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):2259-64. doi: 10.1073/pnas.0909712107. Epub 2010 Jan 19. Proc Natl Acad Sci U S A. 2010. PMID: 20133870 Free PMC article.
ESTprep: preprocessing cDNA sequence reads.
Scheetz TE, Trivedi N, Roberts CA, Kucaba T, Berger B, Robinson NL, Birkett CL, Gavin AJ, O'Leary B, Braun TA, Bonaldo MF, Robinson JP, Sheffield VC, Soares MB, Casavant TL. Scheetz TE, et al. Among authors: soares mb. Bioinformatics. 2003 Jul 22;19(11):1318-24. doi: 10.1093/bioinformatics/btg159. Bioinformatics. 2003. PMID: 12874042
522 results