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Deep Impact: observations from a worldwide Earth-based campaign.
Meech KJ, Ageorges N, A'Hearn MF, Arpigny C, Ates A, Aycock J, Bagnulo S, Bailey J, Barber R, Barrera L, Barrena R, Bauer JM, Belton MJ, Bensch F, Bhattacharya B, Biver N, Blake G, Bockelée-Morvan D, Boehnhardt H, Bonev BP, Bonev T, Buie MW, Burton MG, Butner HM, Cabanac R, Campbell R, Campins H, Capria MT, Carroll T, Chaffee F, Charnley SB, Cleis R, Coates A, Cochran A, Colom P, Conrad A, Coulson IM, Crovisier J, deBuizer J, Dekany R, de Léon J, Dello Russo N, Delsanti A, DiSanti M, Drummond J, Dundon L, Etzel PB, Farnham TL, Feldman P, Fernández YR, Filipovic MD, Fisher S, Fitzsimmons A, Fong D, Fugate R, Fujiwara H, Fujiyoshi T, Furusho R, Fuse T, Gibb E, Groussin O, Gulkis S, Gurwell M, Hadamcik E, Hainaut O, Harker D, Harrington D, Harwit M, Hasegawa S, Hergenrother CW, Hirst P, Hodapp K, Honda M, Howell ES, Hutsemékers D, Iono D, Ip WH, Jackson W, Jehin E, Jiang ZJ, Jones GH, Jones PA, Kadono T, Kamath UW, Käufl HU, Kasuga T, Kawakita H, Kelley MS, Kerber F, Kidger M, Kinoshita D, Knight M, Lara L, Larson SM, Lederer S, Lee CF, Levasseur-Regourd AC, Li JY, Li QS, Licandro J, Lin ZY, Lisse CM, LoCurto G, Lovell AJ, Lowry SC, Lyke J, Lynch D, Ma J, Magee-Sauer K, Maheswar G, M… See abstract for full author list ➔ Meech KJ, et al. Among authors: schirmer m. Science. 2005 Oct 14;310(5746):265-9. doi: 10.1126/science.1118978. Epub 2005 Sep 8. Science. 2005. PMID: 16150977
Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity.
Zhernakova A, Kurilshikov A, Bonder MJ, Tigchelaar EF, Schirmer M, Vatanen T, Mujagic Z, Vila AV, Falony G, Vieira-Silva S, Wang J, Imhann F, Brandsma E, Jankipersadsing SA, Joossens M, Cenit MC, Deelen P, Swertz MA; LifeLines cohort study; Weersma RK, Feskens EJ, Netea MG, Gevers D, Jonkers D, Franke L, Aulchenko YS, Huttenhower C, Raes J, Hofker MH, Xavier RJ, Wijmenga C, Fu J. Zhernakova A, et al. Among authors: schirmer m. Science. 2016 Apr 29;352(6285):565-9. doi: 10.1126/science.aad3369. Epub 2016 Apr 28. Science. 2016. PMID: 27126040 Free PMC article.
The effect of host genetics on the gut microbiome.
Bonder MJ, Kurilshikov A, Tigchelaar EF, Mujagic Z, Imhann F, Vila AV, Deelen P, Vatanen T, Schirmer M, Smeekens SP, Zhernakova DV, Jankipersadsing SA, Jaeger M, Oosting M, Cenit MC, Masclee AA, Swertz MA, Li Y, Kumar V, Joosten L, Harmsen H, Weersma RK, Franke L, Hofker MH, Xavier RJ, Jonkers D, Netea MG, Wijmenga C, Fu J, Zhernakova A. Bonder MJ, et al. Among authors: schirmer m. Nat Genet. 2016 Nov;48(11):1407-1412. doi: 10.1038/ng.3663. Epub 2016 Oct 3. Nat Genet. 2016. PMID: 27694959
Linking the Human Gut Microbiome to Inflammatory Cytokine Production Capacity.
Schirmer M, Smeekens SP, Vlamakis H, Jaeger M, Oosting M, Franzosa EA, Ter Horst R, Jansen T, Jacobs L, Bonder MJ, Kurilshikov A, Fu J, Joosten LAB, Zhernakova A, Huttenhower C, Wijmenga C, Netea MG, Xavier RJ. Schirmer M, et al. Cell. 2016 Nov 3;167(4):1125-1136.e8. doi: 10.1016/j.cell.2016.10.020. Cell. 2016. PMID: 27814509 Free PMC article.
Dynamics of metatranscription in the inflammatory bowel disease gut microbiome.
Schirmer M, Franzosa EA, Lloyd-Price J, McIver LJ, Schwager R, Poon TW, Ananthakrishnan AN, Andrews E, Barron G, Lake K, Prasad M, Sauk J, Stevens B, Wilson RG, Braun J, Denson LA, Kugathasan S, McGovern DPB, Vlamakis H, Xavier RJ, Huttenhower C. Schirmer M, et al. Nat Microbiol. 2018 Mar;3(3):337-346. doi: 10.1038/s41564-017-0089-z. Epub 2018 Jan 8. Nat Microbiol. 2018. PMID: 29311644 Free PMC article.
Untargeted Plasma Metabolomics and Gut Microbiome Profiling Provide Novel Insights into the Regulation of Platelet Reactivity in Healthy Individuals.
Vadaq N, Schirmer M, Tunjungputri RN, Vlamakis H, Chiriac C, Ardiansyah E, Gasem MH, Joosten LAB, de Groot PG, Xavier RJ, Netea MG, van der Ven AJ, de Mast Q. Vadaq N, et al. Among authors: schirmer m. Thromb Haemost. 2022 Apr;122(4):529-539. doi: 10.1055/a-1541-3706. Epub 2021 Aug 13. Thromb Haemost. 2022. PMID: 34192775 Review.
Compositional and Temporal Changes in the Gut Microbiome of Pediatric Ulcerative Colitis Patients Are Linked to Disease Course.
Schirmer M, Denson L, Vlamakis H, Franzosa EA, Thomas S, Gotman NM, Rufo P, Baker SS, Sauer C, Markowitz J, Pfefferkorn M, Oliva-Hemker M, Rosh J, Otley A, Boyle B, Mack D, Baldassano R, Keljo D, LeLeiko N, Heyman M, Griffiths A, Patel AS, Noe J, Kugathasan S, Walters T, Huttenhower C, Hyams J, Xavier RJ. Schirmer M, et al. Cell Host Microbe. 2018 Oct 10;24(4):600-610.e4. doi: 10.1016/j.chom.2018.09.009. Cell Host Microbe. 2018. PMID: 30308161 Free PMC article.
Species-level functional profiling of metagenomes and metatranscriptomes.
Franzosa EA, McIver LJ, Rahnavard G, Thompson LR, Schirmer M, Weingart G, Lipson KS, Knight R, Caporaso JG, Segata N, Huttenhower C. Franzosa EA, et al. Among authors: schirmer m. Nat Methods. 2018 Nov;15(11):962-968. doi: 10.1038/s41592-018-0176-y. Epub 2018 Oct 30. Nat Methods. 2018. PMID: 30377376 Free PMC article.
482 results