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The NIA cDNA project in mouse stem cells and early embryos.
Carter MG, Piao Y, Dudekula DB, Qian Y, VanBuren V, Sharov AA, Tanaka TS, Martin PR, Bassey UC, Stagg CA, Aiba K, Hamatani T, Matoba R, Kargul GJ, Ko MS. Carter MG, et al. Among authors: dudekula db. C R Biol. 2003 Oct-Nov;326(10-11):931-40. doi: 10.1016/j.crvi.2003.09.008. C R Biol. 2003. PMID: 14744099 Free article. Review.
Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set.
VanBuren V, Piao Y, Dudekula DB, Qian Y, Carter MG, Martin PR, Stagg CA, Bassey UC, Aiba K, Hamatani T, Kargul GJ, Luo AG, Kelso J, Hide W, Ko MS. VanBuren V, et al. Among authors: dudekula db. Genome Res. 2002 Dec;12(12):1999-2003. doi: 10.1101/gr.633802. Genome Res. 2002. PMID: 12466305 Free PMC article.
Transcriptome analysis of mouse stem cells and early embryos.
Sharov AA, Piao Y, Matoba R, Dudekula DB, Qian Y, VanBuren V, Falco G, Martin PR, Stagg CA, Bassey UC, Wang Y, Carter MG, Hamatani T, Aiba K, Akutsu H, Sharova L, Tanaka TS, Kimber WL, Yoshikawa T, Jaradat SA, Pantano S, Nagaraja R, Boheler KR, Taub D, Hodes RJ, Longo DL, Schlessinger D, Keller J, Klotz E, Kelsoe G, Umezawa A, Vescovi AL, Rossant J, Kunath T, Hogan BL, Curci A, D'Urso M, Kelso J, Hide W, Ko MS. Sharov AA, et al. Among authors: dudekula db. PLoS Biol. 2003 Dec;1(3):E74. doi: 10.1371/journal.pbio.0000074. Epub 2003 Dec 22. PLoS Biol. 2003. PMID: 14691545 Free PMC article.
Age-associated alteration of gene expression patterns in mouse oocytes.
Hamatani T, Falco G, Carter MG, Akutsu H, Stagg CA, Sharov AA, Dudekula DB, VanBuren V, Ko MS. Hamatani T, et al. Among authors: dudekula db. Hum Mol Genet. 2004 Oct 1;13(19):2263-78. doi: 10.1093/hmg/ddh241. Epub 2004 Aug 18. Hum Mol Genet. 2004. PMID: 15317747
Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors.
Nishiyama A, Xin L, Sharov AA, Thomas M, Mowrer G, Meyers E, Piao Y, Mehta S, Yee S, Nakatake Y, Stagg C, Sharova L, Correa-Cerro LS, Bassey U, Hoang H, Kim E, Tapnio R, Qian Y, Dudekula D, Zalzman M, Li M, Falco G, Yang HT, Lee SL, Monti M, Stanghellini I, Islam MN, Nagaraja R, Goldberg I, Wang W, Longo DL, Schlessinger D, Ko MS. Nishiyama A, et al. Cell Stem Cell. 2009 Oct 2;5(4):420-33. doi: 10.1016/j.stem.2009.07.012. Cell Stem Cell. 2009. PMID: 19796622 Free PMC article.
Systematic repression of transcription factors reveals limited patterns of gene expression changes in ES cells.
Nishiyama A, Sharov AA, Piao Y, Amano M, Amano T, Hoang HG, Binder BY, Tapnio R, Bassey U, Malinou JN, Correa-Cerro LS, Yu H, Xin L, Meyers E, Zalzman M, Nakatake Y, Stagg C, Sharova L, Qian Y, Dudekula D, Sheer S, Cadet JS, Hirata T, Yang HT, Goldberg I, Evans MK, Longo DL, Schlessinger D, Ko MS. Nishiyama A, et al. Sci Rep. 2013;3:1390. doi: 10.1038/srep01390. Sci Rep. 2013. PMID: 23462645 Free PMC article.
33 results