Genome-Wide Identification and Characterization of Wheat 14-3-3 Genes Unravels the Role of TaGRF6-A in Salt Stress Tolerance by Binding MYB Transcription Factor

Int J Mol Sci. 2021 Feb 14;22(4):1904. doi: 10.3390/ijms22041904.

Abstract

14-3-3 proteins are a large multigenic family of general regulatory factors (GRF) ubiquitously found in eukaryotes and play vital roles in the regulation of plant growth, development, and response to stress stimuli. However, so far, no comprehensive investigation has been performed in the hexaploid wheat. In the present study, A total of 17 potential 14-3-3 gene family members were identified from the Chinese Spring whole-genome sequencing database. The phylogenetic comparison with six 14-3-3 families revealed that the majority of wheat 14-3-3 genes might have evolved as an independent branch and grouped into ε and non-ε group using the phylogenetic comparison. Analysis of gene structure and motif indicated that 14-3-3 protein family members have relatively conserved exon/intron arrangement and motif composition. Physical mapping showed that wheat 14-3-3 genes are mainly distributed on chromosomes 2, 3, 4, and 7. Moreover, most 14-3-3 members in wheat exhibited significantly down-regulated expression in response to alkaline stress. VIGS assay and protein-protein interaction analysis further confirmed that TaGRF6-A positively regulated slat stress tolerance by interacting with a MYB transcription factor, TaMYB64. Taken together, our findings provide fundamental information on the involvement of the wheat 14-3-3 family in salt stress and further investigating their molecular mechanism.

Keywords: 14-3-3 gene family; Triticum aestivum L.; bioinformatics analysis; protein-protein interactions; salt tolerance.

MeSH terms

  • 14-3-3 Proteins / classification
  • 14-3-3 Proteins / genetics*
  • 14-3-3 Proteins / metabolism
  • Chromosome Mapping
  • Chromosomes, Plant / genetics
  • Evolution, Molecular
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant
  • Genome, Plant / genetics
  • Genome-Wide Association Study / methods*
  • Multigene Family / genetics
  • Phylogeny
  • Plant Proteins / classification
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Protein Binding
  • Salt Stress / genetics*
  • Salt Tolerance / genetics*
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism
  • Triticum / genetics*

Substances

  • 14-3-3 Proteins
  • Plant Proteins
  • Transcription Factors